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SCNpilot_cont_1000_p_scaffold_31_17

Organism: SCNPILOT_EXPT_750_P_Variovorax_66_42

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(15611..17455)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI000375E412 similarity UNIREF
DB: UNIREF100
  • Identity: 76.9
  • Coverage: 610.0
  • Bit_score: 945
  • Evalue 2.80e-272
  • rbh
integrase family protein similarity KEGG
DB: KEGG
  • Identity: 68.7
  • Coverage: 610.0
  • Bit_score: 827
  • Evalue 2.10e-237
  • rbh
Integrase family protein {ECO:0000313|EMBL:ACS22676.1}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 68.7
  • Coverage: 610.0
  • Bit_score: 827
  • Evalue 9.20e-237

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1845
ATGCGCGCACTCGCCCAGGGGGTCGATGAACGCGCCGCCTGGGATCGCTACTTGCGCCTTGAGGGCGAGCACGTCGACCTGCGCACAGTGCGTCGCACCGTGACCTGGATCCGCGATGCGTTCGCCGCTGCCGCGCGCCGTGAGCAGAAGCCGGGCACTGCACGCCTGATCCTGCTCGACCCCGAGCGCTTCACCGCGACACCGGCGCTGCCGAGCCTGGCCGAATTCGCGCAGGCCCAGGGCATGGAGGACTTCTCGGAGGCCGAACAGATCGAAGCGTACGAAGCCGCCTTCGCGCAGGGCGGCGGCGCAGGCACGGGGCGCTCGGCGGGAGGCGGCCAGCCTTCCCGGCGCGCGCGCGTCATCGAGCGTCAACTCGAAGCGCTGCATTGGCTCGAGAGTCTCGTCGCACAGGATCCGCGCCCGGGTGACAGCGTGGTCGCCTGGCTGCATCCGGCCTTGGCCGAGCGGCTCGAGGGCGCGGGACTCGCGACGCTGTCCGCGCTGGTGCTGCGGATCAACGACGCCGGCGCGCGCTGGTGGGCGAATGTCCCAGGCGTGGGCGAGCACAAGGCCGCGCGTATCCTGGACTGGCTCCATGCCAATGAGCAGGTGCTGGGTGTGCGTGTCGGCCTGCATGCGGCGCGCAAGCGTGCGCAGCTCAGTCCTGCCGCGCTGGCAGCGGTGGTCGCGCCCGCCACCGCCCTGGTGCCCTACGAGAAGTTCATACTGCCGGCCGGACTGGATGGCCGTGTCGGGAGCTGCCGCGCGCCGAGACAAACGTGCCGGCTCTCGGCGTCCAATGACCATGAGGCGATTGGCGCCTGGCTGATCGCGAAGGGCGGCGACATCACGAAGAAGTCCCTGTCGTCCACACAGCGCTCGTACCGCAAGGAAGCGGAACGGTTGCTGCTCTGGTCGGTGCTCGAGCGCGGCAAGGCCTTGTCCTCGCTCACCCGTGAAGACGCGGCTGCCTACCGTGCCTTTCTTGCTCGGCCGCCCGCTGCCTGGTGCGGCCCGCGCCATCATCAGCGCTGGTCTCCAATGTGGCGGCCGTTGGAAGGCCCGCTGACGCCGGTGGCACTGCGCCAGGCGCTGGTCATTCTCCGCAGCCTGTTCGCCTTCCTCACGCGCCAGGGGTACGTGACGGGCAATCCCTTCGACGAGACGCCCTTGCCCTCGCAGGACGGGCAGCCGCTCGGCTCCAATCGCACGCTGAGCTTCGCGCAGTGGGACCACATCGATGCGCGGCTGCGCGCGCATGGGGACACCGAGGCTGCTCGACGCCTGCGCCGCGGCATGCGCTGGTTGTACGCGACCGGGCTGCGCCTGGCCGAGATCGCCAGCGTGCGCTGCGGGAATCTGCATTCGCGGCACGAGGCAACATCCGGCGATGGTTCCGCGCCGCCGGGCTGGCTCTTGTCGGTGACTGGCAGGGAAGGGGAGCGCCGCGAGGTGCCGGTGGCGCTCGAGCTGATCGAGGAACTGCAGGAAGAACTGGCGCGCCACGGTTTCGATCGTCAGGTCGACGCTCCCGGCAATCGGGACGTCCCTGTGCTGGCGCGCTTCGGCACCGGGGCCGAGCAGCCGGTTGCCTGGTCGTCCTCGGGGCTCTACCAGGCCATCAAGGCTTTCCTTGCGCGCGTGGCGCGCGATCTCGATGCAGCCGACGCCGAACACCTGAGAAAGGCCAGCACGCACTGGCTGCGCCATACCCATGGCGCGCACGCGCTGCAGGGCAGGGCGGGGCGGGCGCCACTGCCGCTGGCGGTGGTGCAGAACAACCTGGGCCACGCGCTGCCAAGCACGACCTCGATGTACCTGGCGAAGCGGCGTCCCGCCTAG
PROTEIN sequence
Length: 615
MRALAQGVDERAAWDRYLRLEGEHVDLRTVRRTVTWIRDAFAAAARREQKPGTARLILLDPERFTATPALPSLAEFAQAQGMEDFSEAEQIEAYEAAFAQGGGAGTGRSAGGGQPSRRARVIERQLEALHWLESLVAQDPRPGDSVVAWLHPALAERLEGAGLATLSALVLRINDAGARWWANVPGVGEHKAARILDWLHANEQVLGVRVGLHAARKRAQLSPAALAAVVAPATALVPYEKFILPAGLDGRVGSCRAPRQTCRLSASNDHEAIGAWLIAKGGDITKKSLSSTQRSYRKEAERLLLWSVLERGKALSSLTREDAAAYRAFLARPPAAWCGPRHHQRWSPMWRPLEGPLTPVALRQALVILRSLFAFLTRQGYVTGNPFDETPLPSQDGQPLGSNRTLSFAQWDHIDARLRAHGDTEAARRLRRGMRWLYATGLRLAEIASVRCGNLHSRHEATSGDGSAPPGWLLSVTGREGERREVPVALELIEELQEELARHGFDRQVDAPGNRDVPVLARFGTGAEQPVAWSSSGLYQAIKAFLARVARDLDAADAEHLRKASTHWLRHTHGAHALQGRAGRAPLPLAVVQNNLGHALPSTTSMYLAKRRPA*