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SCNpilot_cont_1000_p_scaffold_31_30

Organism: SCNPILOT_EXPT_750_P_Variovorax_66_42

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 46653..47894

Top 3 Functional Annotations

Value Algorithm Source
Serine-type D-Ala-D-Ala carboxypeptidase (EC:3.4.16.4); K07258 D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] similarity KEGG
DB: KEGG
  • Identity: 82.4
  • Coverage: 414.0
  • Bit_score: 674
  • Evalue 2.60e-191
  • rbh
Penicillin-binding protein 6. Serine peptidase. MEROPS family S11 n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21ZY6_RHOFD similarity UNIREF
DB: UNIREF100
  • Identity: 82.4
  • Coverage: 414.0
  • Bit_score: 674
  • Evalue 8.20e-191
  • rbh
Penicillin-binding protein 6. Serine peptidase. MEROPS family S11 {ECO:0000313|EMBL:ABD68667.1}; Flags: Precursor;; TaxID=338969 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Rhodoferax.;" source="Rhodoferax ferrireducens (strain ATCC BAA-621 / DSM 15236 / T118); (Albidiferax ferrireducens).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.4
  • Coverage: 414.0
  • Bit_score: 674
  • Evalue 1.10e-190

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Taxonomy

Rhodoferax ferrireducens → Rhodoferax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1242
ATGCAATTCAAGACTCCCTCCATCCTCCCGCTCGCCTTCGCAATCGCCACGGGCGCCCTGGTTTCTGGCACACCCGCTTTCGCGGCCTCCCATGCGGCCAAGCCTGCAGCCCACAAGAAGCCCGCCGCCGCCGCGCCTGCCCAGGCACCGGTGGCCGGCCAATCGGCCGTAGCCGGCGGACCGCCGGCGTTGCCGGCCAAGGCGTGGCTGCTGATGGACTTCGATTCTGGCGAGGTGCTGGCCTCGGCCAATCCCGACGAACCGCTGCCGCCGGCGTCGCTGACCAAGATGATGACCAGCTTCCTGGTCGAGCAGGCACTTCGCTCGGGCAAGCTCAAGAAGGACGATCTCGTCTCGGTCAGCCAGAACGCCTGGTGCCGCGGCTCGAGCACCGAGTCCTGCATGTACCTGCCGCTGAACAGCCAGGCCACCGTGATCGACATCCTGCGCGGCATCATCGTCCAGTCGGGCAATGACGCGTCCAAGGCGATCGCCGAGCACATGGCCGGCACCGAGGAGGGCTTTGCCAAACTCATGAATGCCGAAGCCCAGCGCCTGGGCATGACGCACACGCATTTCGTGAACTCCACGGGCCTGCCCGATCCCGATCACAAGTCGTCCGCGCGCGACCTCGCGATCCTGGCGCGCGCGATCATCCGCGACAGTTCGGAGTACTACCCGATCTACGCGGAGCGCGAGTTCAAGTACAACGGGATCAAGCAGGGAAATCGCAATGCGCTGCTCTACACCGACCCCACGGTCGACGGGCTGAAGACGGGACATACCCAGGAAGCGGGCTTCTGCCTCGTGACTTCCTCCAAGCGCAACGGCATGCGCCTGATCACCGTGATTCTCAACACCAACAGCGCGCAGGCGCGCGCCGACGAAACCCGCGCGCTCCTCGGGTGGGGGTACGGCAACTTCGAGAAGGCCACCCCCATTCAGTCCAACACCGTGGTCACGACGACCAACGTCCGCTTCGGCAAGGCCGATACCGTTGCCGCGGGCCTGGGAGCGCCCTGGACGGTGACGGTGCCGCGCGGCCAGAAAGTGAACACCTCCGTGCAGATCAATCCGAAGCTGGAGGCGCCGGTGGCCAAGGGCGCGGTGATCGGCAAGGTGGTCGCGGAGTCGAACGGCAAAGCGGTGGGAGAAGCACCGCTGGTTGCGCAGGCTGACGTGGAGCGCGCCGGCTTCATGCTGCGTACATGGCAGCGCGTGACCGGATTGTTCGGCAAGTAG
PROTEIN sequence
Length: 414
MQFKTPSILPLAFAIATGALVSGTPAFAASHAAKPAAHKKPAAAAPAQAPVAGQSAVAGGPPALPAKAWLLMDFDSGEVLASANPDEPLPPASLTKMMTSFLVEQALRSGKLKKDDLVSVSQNAWCRGSSTESCMYLPLNSQATVIDILRGIIVQSGNDASKAIAEHMAGTEEGFAKLMNAEAQRLGMTHTHFVNSTGLPDPDHKSSARDLAILARAIIRDSSEYYPIYAEREFKYNGIKQGNRNALLYTDPTVDGLKTGHTQEAGFCLVTSSKRNGMRLITVILNTNSAQARADETRALLGWGYGNFEKATPIQSNTVVTTTNVRFGKADTVAAGLGAPWTVTVPRGQKVNTSVQINPKLEAPVAKGAVIGKVVAESNGKAVGEAPLVAQADVERAGFMLRTWQRVTGLFGK*