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SCNpilot_cont_1000_p_scaffold_135_16

Organism: SCNPILOT_EXPT_750_P_Variovorax_66_42

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 15412..16233

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator n=1 Tax=Variovorax sp. CF313 RepID=J2T789_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 97.0
  • Coverage: 271.0
  • Bit_score: 513
  • Evalue 1.60e-142
  • rbh
Transcriptional regulator {ECO:0000313|EMBL:EJL73927.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.0
  • Coverage: 271.0
  • Bit_score: 513
  • Evalue 2.20e-142
IclR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 95.3
  • Coverage: 276.0
  • Bit_score: 508
  • Evalue 9.50e-142
  • rbh

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 822
ATGAGAAAAAACCAATCAGACATTCCCGCCGTTCCCGTGATCCAGGTGATCGAGCGCATGTTCGCGCTGATCGATGTCCTGGCATCGCGCGAAGAGGCGATTTCGCTGAAGGAGATCAGCGAAAAGACCGGTCTTCACCCGTCGACCACGCACCGCATCCTCAACGACCTGGCGGTCGGCCGCTTCGTCGACCGGCCCGAGGCGGGCAGCTACCGCCTCGGCATGCGCCTGCTGGAGCTGGGCAACCTGGTCAAGGGCCGGCTCAACGTGCGCGACGCCGCGCTGGGGCCCATGCGCGAGCTGCACAAGCTCACGCAGCAGCCGGTCAACCTGAGCATGCGCCAGGGCGATGAGATCGTGTACATCGAGCGCTCGTACAGCGAGCGCTCGGGCATGCAGGTGGTGCGCGCCATCGGCGGCCGCGCCGCCCTGCACCTCACCTCGACCGGCAAGCTGTTCCTGGCCGCGGACGATCCGCAGCGGGTGCGCAGCTACGCCACCCGCACCGGGCTGGCCGGGCACACGCGCAACAGCATCACCCAACTGCCCGCGCTCGAGCGCGAGCTGTCGAAAGCGCGCCAGTACGGCATCGCACGTGACAACGAAGAGCTGGAATTGGGCGTGCGCTGCATGGCAGCAGGCATCTACGACGACCAGGGCAAGCTGGTGGCGGGCCTGTCCATTTCCGCTCCGGCCGATCGGCTGGACGAAGGCTGGCTGCCCAAGCTTCAGGCCACGGCCAATGAAATCTCGGGCGCCCTGGGGTTCAAGGACGGGGTGGCGGCGACACCGGCGAACGGCGCCCCTTCTGTCGGCGCCTGA
PROTEIN sequence
Length: 274
MRKNQSDIPAVPVIQVIERMFALIDVLASREEAISLKEISEKTGLHPSTTHRILNDLAVGRFVDRPEAGSYRLGMRLLELGNLVKGRLNVRDAALGPMRELHKLTQQPVNLSMRQGDEIVYIERSYSERSGMQVVRAIGGRAALHLTSTGKLFLAADDPQRVRSYATRTGLAGHTRNSITQLPALERELSKARQYGIARDNEELELGVRCMAAGIYDDQGKLVAGLSISAPADRLDEGWLPKLQATANEISGALGFKDGVAATPANGAPSVGA*