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SCNpilot_cont_1000_p_scaffold_234_10

Organism: SCNPILOT_EXPT_750_P_Variovorax_66_42

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(11132..11878)

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter permease n=1 Tax=Variovorax paradoxus RepID=UPI000370AB3A similarity UNIREF
DB: UNIREF100
  • Identity: 86.4
  • Coverage: 242.0
  • Bit_score: 411
  • Evalue 7.80e-112
  • rbh
polar amino acid ABC transporter permease; K02029 polar amino acid transport system permease protein similarity KEGG
DB: KEGG
  • Identity: 80.8
  • Coverage: 250.0
  • Bit_score: 393
  • Evalue 5.30e-107
Polar amino acid ABC transporter, inner membrane subunit {ECO:0000313|EMBL:ADX46743.1}; TaxID=643561 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB; 1011).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.8
  • Coverage: 250.0
  • Bit_score: 393
  • Evalue 2.30e-106

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Taxonomy

Acidovorax avenae → Acidovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 747
ATGAGCGACCCCGGCCTGCTCGCACAGGCGGTGGCGGCCATCAAGCCGCTGGGGCTGAACTACGCCTTCCTGCTCGACCTGGGCGAACGGCAGGCCTTCCTGCGCGGGCTGCTGGTCACGCTCGAGCTTTGCCTGCTGACCATTCCCTGCAGCCTCGCGGCAGGCGTGGCCATGGCCGCGGCACTCATCTCCGGGCACCGCTGGCTGGCACTGCCGGCGCGCGCCTTCGTCGAAGTCACGCGCAACACGCCGACGCTGGTACAGCTGTACTGCGCCTTCCTGGTGCTCAACATGCTCATCACGCGCCAGCTCGAAGGCGTGGGTGGCAACCCGCTCACACCCTTCGTGTGGGTGGTGATCGTGGTGGCGATCCACAAGGGCGCTTTCCATGCCGAGGCGCTGCGCGCGGGCATCGAGGCGGTGCCGCAGGTCACGCTGGAGGCGGCGCGCTCCCTGGGCTTCTCGCAGCGCCAGCTGCTGTGGCGCGTGGAGCTGCCGCTGGCCGTGCGCTTTGCGCTGCCCTCGCTGGTCAACAACCTGGTCGACCTGGTGAAGATGACGGCGGTGGCCTCGGCCATCGCGGTGGGCGACGTGACCTACGAGTCGATCATGATCTGGACGCAGCGCGACAACGTGCTGGAGTTGCTGCTGCTGATCCTGCTGTACTTCGGCGCGCTGACCTGGCTGGTCAGCCGTGCCGGCAGCTGGCTCGAAGCCCGCCTGAGGATGCCCGGCTATGGCCAATGA
PROTEIN sequence
Length: 249
MSDPGLLAQAVAAIKPLGLNYAFLLDLGERQAFLRGLLVTLELCLLTIPCSLAAGVAMAAALISGHRWLALPARAFVEVTRNTPTLVQLYCAFLVLNMLITRQLEGVGGNPLTPFVWVVIVVAIHKGAFHAEALRAGIEAVPQVTLEAARSLGFSQRQLLWRVELPLAVRFALPSLVNNLVDLVKMTAVASAIAVGDVTYESIMIWTQRDNVLELLLLILLYFGALTWLVSRAGSWLEARLRMPGYGQ*