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SCNpilot_cont_1000_p_scaffold_234_12

Organism: SCNPILOT_EXPT_750_P_Variovorax_66_42

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(13110..13934)

Top 3 Functional Annotations

Value Algorithm Source
amino acid ABC transporter n=1 Tax=Cupriavidus sp. WS RepID=UPI00036448C1 similarity UNIREF
DB: UNIREF100
  • Identity: 84.6
  • Coverage: 272.0
  • Bit_score: 465
  • Evalue 3.80e-128
  • rbh
Bacterial extracellular solute-binding s, 3 family protein {ECO:0000313|EMBL:KFJ14400.1}; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (Pseudomonas acidovorans) (Comamonas acidovorans).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.3
  • Coverage: 265.0
  • Bit_score: 463
  • Evalue 2.00e-127
extracellular solute-binding protein similarity KEGG
DB: KEGG
  • Identity: 84.9
  • Coverage: 265.0
  • Bit_score: 462
  • Evalue 7.80e-128

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Taxonomy

Delftia acidovorans → Delftia → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 825
ATGACGCCACGCATCTTCCTTCCTCTGCTGCCGATGCTTTTCCTGGCGGCGGGCACCGGCGCCCACGCCGATGCCACCCTCGACAAGATCAAGCAACGCGGCAAACTGACCGTCGGCGTCATCCTCTCGGGACCGCCCTTCGGCACCATCGACCCGGCCACGCAGAAGCCCGTGGGCTACAACGTGGAACTGGCCGAGGGCGTCGCCAAGGGACTGGGCGTGGGGCTGGAGACCGTGCAGGTGCAGCCGTCGAACCGGGTGCAGTTCCTGCAGCAGGGCAAGGTCGACATCCTCATCGCCAACATGCAGTGGACGCAGGAGCGCAGCGAAATTCTCTCGTTCGTACCCACGCCATTCGAGGAAGTGGGCGGCGCGGCCATCGCCCGCAAGGACAGCGGCCTTGCGAAATGGGAAGACCTGCGCGGCAAGCCGGTGTGCGTGTCGCAGGGCAGCAACTTCACCAAGCCGCTGGCCGAACAGTACGGCGCACAGATCAAGGCCTTTCGCGGACAGCCCGAATCGCTGCTGGCGCTCAAGGGCGGCAACTGCGTGGCGGCCGTGCACGTGAGCCCCACGCTGCGCGAGCTGGTGACGGGCAACGCCGACTGGAAGGACTACGCCATCGTCTCACCGTCGGACCTGATTCCCTCGCCTTCCGTCATCTGGGTGCGCAAGGGCGAGGCCGACACGCAGGCGGCCATCGACCGCATCGTGCAGAACTGGCACCGCACAGGATGGCTCATCGAGGTCGAGAAGAAGAACGGCATGACGCCCACGCCGCTGCTGCATGAGCTGAAGGCGAAGTTCGCGAAGGCACCGCTGTGA
PROTEIN sequence
Length: 275
MTPRIFLPLLPMLFLAAGTGAHADATLDKIKQRGKLTVGVILSGPPFGTIDPATQKPVGYNVELAEGVAKGLGVGLETVQVQPSNRVQFLQQGKVDILIANMQWTQERSEILSFVPTPFEEVGGAAIARKDSGLAKWEDLRGKPVCVSQGSNFTKPLAEQYGAQIKAFRGQPESLLALKGGNCVAAVHVSPTLRELVTGNADWKDYAIVSPSDLIPSPSVIWVRKGEADTQAAIDRIVQNWHRTGWLIEVEKKNGMTPTPLLHELKAKFAKAPL*