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SCNpilot_cont_1000_p_scaffold_234_16

Organism: SCNPILOT_EXPT_750_P_Variovorax_66_42

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(18250..20031)

Top 3 Functional Annotations

Value Algorithm Source
histidine kinase n=1 Tax=Variovorax paradoxus RepID=UPI000371ABA7 similarity UNIREF
DB: UNIREF100
  • Identity: 87.9
  • Coverage: 578.0
  • Bit_score: 998
  • Evalue 2.70e-288
  • rbh
putative receiver domain-containing sensor histidine kinase similarity KEGG
DB: KEGG
  • Identity: 52.3
  • Coverage: 599.0
  • Bit_score: 534
  • Evalue 3.50e-149
Putative receiver domain-containing sensor histidine kinase {ECO:0000313|EMBL:AGU51617.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 52.3
  • Coverage: 599.0
  • Bit_score: 534
  • Evalue 1.60e-148

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1782
ATGCCATCGATGAATGACCCGCTTCCGCCCGAGCTGGCCGAGCGGGTGCTGCGCGAGCAGGTGGCGGCGGTCCATGCCAATGCGCCGGCAGCCTATCTCGCGGACTTCCTCACGGCACAGGCACTGGGCATCGGGCTGTTCGTGGCCACGTGGCGATGGCAGGTCCTGCTGTGGATGGCGCTGCACCTGGCGTTGACGCTGCGGCGCGCCTACAGGCGCTATCGGCGCAGCCCCGATGCACTGGCCCATCCCGAGTACTGGGCACGCTTCAATGCGCGCAACGTGCTGCTTCGCTCCTGCGTCTGGGGCCTGGCGCCCTGGCTGTGCGTTCCGCCGGGACGCCACCTGGGGCTTTGGGTCATGGTCATCGTGATGATGATGGGCGGCTGCGCCGGCGGCGCGCTGTCGCTGGCGGTTCTCAAGCGCAATATTCCGCGCTTCATCGTGCCCAGCATGGCGAGCCTGACCCTGGCGTTGGCCTGGCGCGGCGACAGCACGCACCTGTTCCTGGCCACGGGATGCCTGCTGTACCTGTGCGTCATGATCATGTTCGCGCTGCAGCACCATCGGCTGTTGACCGCCTCGCTGACGATGCGTTTCGAAAAGGAGGCGCTGGCCGAGCAACTGAGCCATCAGATTGCCGCGACCCAGCGGGCCAGCGAGGAGAAGACGCGTTTTCTTGCCGCGGCGAGCCACGATCTGCGCCAGCCTCTGCACGCCATCGCCTTGTTCGGCGCCGTCATCGAGAAGAAGCTCAAGGGCAGCGACGAATGGGACCACGCGGTGCGGCTGATGGATGCGGTCGGAACGCTCGGCGATTCGCTGGATATCCTGCTGGACATCTCGCGGCTGGATGCCGGCGAGGTGGCGCCGCAGGTCCGGCCGGTGGAACTCAATCCATTGTTCCTCGCGCTCAACAATGTGTTCGTGGCGCAGGCGGCAGACCTGGATCTGCAATTGCGGCTGCGCGCCACGCCCTGCTGGGTGCTGAGCGACCCGCAACTGCTGCAACGCCTGCTTTCCAATCTTGTGCACAACGCGCTCAAGTACACGACGCGCGGCGGCGTGGTGGTGGCGGCCCGGGCGCGCGGGCCGCTGGTGTGGATCGACGTATGCGACACCGGCATCGGCATCGCGGACGAGCACCTCGGCCGCATCTTCGACGAGTTCTATCAGATCGACAATCCGGGGCGCGATCGGACGAAGGGACTGGGCATCGGGCTGTCCATCGTGCAGCGGCTCTCGCGCCTGCTGGCGCATCCGCTGCAGGTGCGCTCGCGGCTGCATCACGGCAGCCGCTTCCGGCTGGTGCTTCCGGCTGTGACGGCCTTGGGGTCGCCGCCTCTCGCCGCACTGCCGGGCGCCCCGCTGCCGTTGCCGCGGCGCGTGCTCGTCATCGATGACGAGGCCGCGATCCGACAGGCTGTCGCCGGCCTGCTGCAGGCCCACGGCCTGAGCGTCGACGCGGTGGCGAGCGAGGCGGACGCCGAGGCCGTGCTGGCCCATGCCGCGCATGGAAGTACCCCGGTCGAAGTACTGCTGTGCGACGTACGGCTGGCCGACGGTGCCGATGGACTGGCCGCGGCGCAGCGCCTGCGCGCGCGCTTCGGCCCCGGCCTGCAGGTCTTGCTGATCACCGGGGAAACCGCACCGCAACGACAGCGGCAGATGCGCGACTCGGGGTTGCAGGTCCTGCTCAAGCCGGTGGCCGCCGACAGGCTTCTGCAGGCCCTCGCGTCGTTGACGCGGCACGACACGCCGCACGTTCGCATGCGCGCCTGA
PROTEIN sequence
Length: 594
MPSMNDPLPPELAERVLREQVAAVHANAPAAYLADFLTAQALGIGLFVATWRWQVLLWMALHLALTLRRAYRRYRRSPDALAHPEYWARFNARNVLLRSCVWGLAPWLCVPPGRHLGLWVMVIVMMMGGCAGGALSLAVLKRNIPRFIVPSMASLTLALAWRGDSTHLFLATGCLLYLCVMIMFALQHHRLLTASLTMRFEKEALAEQLSHQIAATQRASEEKTRFLAAASHDLRQPLHAIALFGAVIEKKLKGSDEWDHAVRLMDAVGTLGDSLDILLDISRLDAGEVAPQVRPVELNPLFLALNNVFVAQAADLDLQLRLRATPCWVLSDPQLLQRLLSNLVHNALKYTTRGGVVVAARARGPLVWIDVCDTGIGIADEHLGRIFDEFYQIDNPGRDRTKGLGIGLSIVQRLSRLLAHPLQVRSRLHHGSRFRLVLPAVTALGSPPLAALPGAPLPLPRRVLVIDDEAAIRQAVAGLLQAHGLSVDAVASEADAEAVLAHAAHGSTPVEVLLCDVRLADGADGLAAAQRLRARFGPGLQVLLITGETAPQRQRQMRDSGLQVLLKPVAADRLLQALASLTRHDTPHVRMRA*