ggKbase home page

SCNpilot_cont_1000_p_scaffold_263_2

Organism: SCNPILOT_EXPT_750_P_Variovorax_66_42

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 784..2019

Top 3 Functional Annotations

Value Algorithm Source
Drug resistance transporter, Bcr/CflA subfamily n=1 Tax=Variovorax sp. CF313 RepID=J2KBK4_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 97.3
  • Coverage: 411.0
  • Bit_score: 812
  • Evalue 2.50e-232
  • rbh
Drug resistance transporter, Bcr/CflA subfamily {ECO:0000313|EMBL:EJL77615.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.3
  • Coverage: 411.0
  • Bit_score: 812
  • Evalue 3.50e-232
Bcr/CflA subfamily drug resistance transporter; K07552 MFS transporter, DHA1 family, bicyclomycin/chloramphenicol resistance protein similarity KEGG
DB: KEGG
  • Identity: 94.6
  • Coverage: 410.0
  • Bit_score: 785
  • Evalue 6.00e-225
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1236
ATGAATCCCGACGCAGACAAACTCTGGCAGGCGCCGCGCTGGGCGCTTGCCGTGCTGCTCGCCGTGCTGGGCATGCTCGGTCCCTTCTCGATCGACACCTACATCCCCGCGTTCTCCGGCATCGCGCAGTCGATCGGCGCCACGCCGGCCGAGATGCAGCAGACGCTCTCTGCCTACCTGTTCGGCTTCGCGTTCATGAACCTGTTCCACGGCGCGCTGTCGGACAGCTTCGGGCGCCGCCCCGTGGTGCTGTGGGGGCTGGCGGTGTTCACGCTGGCCTCGCTGGGCTGCGCGCTGTCGCAGAACATCACGCAGCTGGTGCTGTTCCGCGGGCTGCAGGGCCTGTCGACCGGCGCGGGCATCGTGGTGTCGCGCGCGGTGATCCGCGACATGTTCCCGCCCGCCGAGGCGCAGCGGGTCATGAGCCAGGTCACGATCTACTTCGGCGTGGCGCCGGCCATCGCGCCCATCGTGGGCGGCTTCCTGTTCGTGCACGCCGGCTGGCATGCGGTGTTCTGGTTCCTTGTGGCGGTGGGCGTGGTGCTGTTCACCGCCAACTACAAGCTGCTGCCCGAGACGCTGCACAAGGACCATCGCCAGCCCTTCCAGGTGCGCCACCTGATGCGCGGCTACTGGGACCTGTGCTCCGACCCGCGCTTCCTGCTGCTGGCCTTTGCCAGCGGCGTGCCCTTCAACGGCATGTTCCTCTACGTGCTGGCCGCGCCCGCCTTCCTGGGCGACCACCTGGCGCTGCAGCCGCAGCAGTTCTTCTGGTTCTTCCTGCTGACCATCGGCGGCATCATGCTCGGCGCGCGCGCCAGCGGACGCATGGCCGGCAAGGTCGCGCCCAAGCGGCAGATCCGCGACGGCTTTCTCATCATGCTGATCACCTCGGTGGTCAACGTGGTGGCCAACACCTTCTTCCAGGCGCACGTGGCGTGGGCGCTGTGGCCGCTGGCGGTGTTCGCCTTCGGCTGGGCGCTGATGGTGCCGGTGGTCACGCTGCTGGTGCTCGACCTTCATCCGGAGCGCCGCGGCATGGCCTCGTCGCTGCAGGCCGTGATCGGCTCCACCGCCAACGGCATCGTGGCCGGCGCGGTGGCGCCGCTGGTGATGCATTCCACGCTCGCACTGGCGCTGACCTCCATGGCCATGCTCGCCATCGGCCTCGTCGCCTGGGTGTGGCTGCACGGCCGCTGGCCGGAGATCGGGCGCATGGTCGCCCACGAAGGCTGA
PROTEIN sequence
Length: 412
MNPDADKLWQAPRWALAVLLAVLGMLGPFSIDTYIPAFSGIAQSIGATPAEMQQTLSAYLFGFAFMNLFHGALSDSFGRRPVVLWGLAVFTLASLGCALSQNITQLVLFRGLQGLSTGAGIVVSRAVIRDMFPPAEAQRVMSQVTIYFGVAPAIAPIVGGFLFVHAGWHAVFWFLVAVGVVLFTANYKLLPETLHKDHRQPFQVRHLMRGYWDLCSDPRFLLLAFASGVPFNGMFLYVLAAPAFLGDHLALQPQQFFWFFLLTIGGIMLGARASGRMAGKVAPKRQIRDGFLIMLITSVVNVVANTFFQAHVAWALWPLAVFAFGWALMVPVVTLLVLDLHPERRGMASSLQAVIGSTANGIVAGAVAPLVMHSTLALALTSMAMLAIGLVAWVWLHGRWPEIGRMVAHEG*