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SCNpilot_cont_1000_p_scaffold_263_3

Organism: SCNPILOT_EXPT_750_P_Variovorax_66_42

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 2039..3166

Top 3 Functional Annotations

Value Algorithm Source
membrane protein n=1 Tax=Variovorax paradoxus RepID=UPI000361AA93 similarity UNIREF
DB: UNIREF100
  • Identity: 91.7
  • Coverage: 375.0
  • Bit_score: 678
  • Evalue 3.90e-192
  • rbh
CBS-domain-containing membrane protein {ECO:0000313|EMBL:EJL77614.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.0
  • Coverage: 375.0
  • Bit_score: 678
  • Evalue 7.20e-192
CBS domain containing membrane protein; K07168 CBS domain-containing membrane protein similarity KEGG
DB: KEGG
  • Identity: 87.7
  • Coverage: 374.0
  • Bit_score: 655
  • Evalue 1.10e-185
  • rbh

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1128
ATGCGGTTCGACGCCCTGCTGACCCACGCGCGCGCCTGGCTGCCGGCGCGCACCACCGTCGATGCGCGCGAGCGCCTGCGCGCCGTCTGCGGTGCCGGCCTCGGCCTGCTGGTCGCGGCGCTGCTGTCGCACTGGCTCGCGACGCCGCTGCATGCGAGCGTGTGGCTGATCGCGCCGCTGGGCGCCAGCGCGGTGCTGGTGTTCGCCGTGCCCGCGAGCCCGCTGGCACAGCCCTGGTCGGTGATCGGCGGCAACACGCTGTCGGCGGTGGTGGGCATCGCCTGCGCCAACTGGATTCCCGAGCCGACCATCGCGGCCGCCGTCGCGGTGGCCCTGGCCATCGCACTGATGTTCAGCGCGCGCTGCCTGCACCCGCCGGGCGGCGCCGCGGCGCTGCTCGCGGTGCTGACGCACACCACGCATTTCTCTTCCGCGCTGTTCCCTTTCTTCACCAACTCGCTGCTGCTGGTGCTGGCCGGCGTGCTCTACAACACGCTCACCGGGCGGCGCTATCCGCATGTGCAGGTCGCGCGCCCGCCGGCGGCCGATGCGCGCTTCAGCCAGGCCGACATCGACGCCGTGCTGGCCCGCTACAACCAGGTGCTGGACATCAGCCGCGACGACCTCGAGTCGCTGATTCAGCAGACAGAGCTGGAGTCGTACAAGCGCCGGCTGGGCACGCTGCATTGCGCCGACATCATGTCGCGCGAGCCCATCTCGGTGGAGTTCGGCACGCCGCTGCAGGAAGCCTGGGCGCTGATGCACGAGCGCCGCATCAAGGCCCTGCCCATCACGGACCGCACGCGCCGGGTGGTCGGCATCGTCACGCAGGCCGACTTCTTCCGCCAGCTCGACCTGCAGCACCACGAAGGCATTGCGGGCAAGCTGCGCGACCTGATCCGCGCCACGCGCACCGTCATGTCGAACAAGCCCGAGGTGGTCGGCCAGATCATGACGCGCCAGGTGCGCGTGGCCAGCGCCGACCGGCCGGTGGTCGACCTGGTGCCGCTGTTTTCCGAGGGCGGGCATCACCACATTCCGATCATCGATGGCGAGAAGCGCCTGGCGGGGATGATCACGCAGTCGGATTTCGTGCGGGCGCTGTATCGCGCCGTCGGGCCGGCGTAA
PROTEIN sequence
Length: 376
MRFDALLTHARAWLPARTTVDARERLRAVCGAGLGLLVAALLSHWLATPLHASVWLIAPLGASAVLVFAVPASPLAQPWSVIGGNTLSAVVGIACANWIPEPTIAAAVAVALAIALMFSARCLHPPGGAAALLAVLTHTTHFSSALFPFFTNSLLLVLAGVLYNTLTGRRYPHVQVARPPAADARFSQADIDAVLARYNQVLDISRDDLESLIQQTELESYKRRLGTLHCADIMSREPISVEFGTPLQEAWALMHERRIKALPITDRTRRVVGIVTQADFFRQLDLQHHEGIAGKLRDLIRATRTVMSNKPEVVGQIMTRQVRVASADRPVVDLVPLFSEGGHHHIPIIDGEKRLAGMITQSDFVRALYRAVGPA*