ggKbase home page

SCNpilot_cont_1000_p_scaffold_263_5

Organism: SCNPILOT_EXPT_750_P_Variovorax_66_42

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(4331..5536)

Top 3 Functional Annotations

Value Algorithm Source
Putative acyl-CoA transferase/carnitine dehydratase n=1 Tax=Variovorax sp. CF313 RepID=J2TGQ1_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 94.3
  • Coverage: 402.0
  • Bit_score: 756
  • Evalue 1.60e-215
  • rbh
Putative acyl-CoA transferase/carnitine dehydratase {ECO:0000313|EMBL:EJL77612.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.3
  • Coverage: 402.0
  • Bit_score: 756
  • Evalue 2.20e-215
L-carnitine dehydratase/bile acid-inducible protein f similarity KEGG
DB: KEGG
  • Identity: 91.7
  • Coverage: 396.0
  • Bit_score: 731
  • Evalue 1.70e-208
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1206
ATGAGTAGCGCTGGCGAAAACAAGCGCCTGCCGCTCGCCGGCATCCGCGTGGTCGAGTTCACCCACATGGTCATGGGGCCGACCTGCGGCATGGTGCTCGCGGACCTGGGCGCGGAAGTCATCAAGGTCGAGCCCATCGAAGGCGACCGCACGCGGCACCTGCTGGGCGCGGGCGCGGGCTTCTTTCCCATGTTCAACCGCAACAAGAAAAGCATCGCGCTCGACCTGCGCAACCCCCAGGGGCTGGAGGCCGCGCTGCGCTTGTGCGCCACGGCCGACGTGGTGGCGCAGAACTTCAAGCCCGGCACCATGGACAAGTACGGCCTGGGCTATGCCGCGCTCGGCAAGCTCAACCCGCGCCTGGTGTACGTGAACCACACGGGCTTCCTGCCCGGCCCCTACGAGCACCGCACCGCGCTCGACGAGGTGGTGCAGATGATGGGCGGGCTGGCCTACATGACGGGCCGCCCCGGCGATCCGCTGCGCGCGGGCACCAGCGTGAACGACATCATGGGCGGCATGTTCGGCGCCATCGGCGCCATCGCCGCGCTGATGCAGCGCGCCGAGACCGGCAAGGGGCAGGAGGTGCAGTCCGCGCTGTTCGAGAACAACGTGTTCCTGGTCGGCCAGCACATGATGCAGTACGCCATCACCGGCGAGGCGGCGGCGCCGATGCCGGACCGCATTTCGGCCTGGGCGCTGTACGACGTGTTCACCGTAAAAGACGGCGAGCAGATCTTCCTGGCCGCGGTGAGCGACGCGCAGTGGAAGACTTTTTGCGACGCGCTGGGCTTCGACGACCTGAAGTCCGACGCCGCCTTGCAGACCAACAACCAGCGCGTGCGCGCGCGGCCCACTCTGCTGGCCGACCTGCGCGAGCGGCTGGCCGGGCGTTCGGCGCAGGAGCTTTCGGCCATCTTCGAGGCCAACGGCCTGCCTTTCGCGCCGATCACCCGGCCCGAAGACCTGTACGCCGACCCGCACCTCAAGGCCACCGGCGGCCTCGCGGACATCCGCCTGCCCGACGGCGAACGCGCCGGGGAAACGGCGCAGACCACGCTGTTCCCGATCACGCTGGGCGGCGAGCGCCTGGGCGTGCGCATGAACCCGCCGACGCTGGGCGAGCACACCCGCGAACTGCTGGCCGAACTGGGCTACGCGAGCGAGCAGGTCGATGCCCTGCTTGCCGGCTCGGCGGTGGCCTGA
PROTEIN sequence
Length: 402
MSSAGENKRLPLAGIRVVEFTHMVMGPTCGMVLADLGAEVIKVEPIEGDRTRHLLGAGAGFFPMFNRNKKSIALDLRNPQGLEAALRLCATADVVAQNFKPGTMDKYGLGYAALGKLNPRLVYVNHTGFLPGPYEHRTALDEVVQMMGGLAYMTGRPGDPLRAGTSVNDIMGGMFGAIGAIAALMQRAETGKGQEVQSALFENNVFLVGQHMMQYAITGEAAAPMPDRISAWALYDVFTVKDGEQIFLAAVSDAQWKTFCDALGFDDLKSDAALQTNNQRVRARPTLLADLRERLAGRSAQELSAIFEANGLPFAPITRPEDLYADPHLKATGGLADIRLPDGERAGETAQTTLFPITLGGERLGVRMNPPTLGEHTRELLAELGYASEQVDALLAGSAVA*