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SCNpilot_cont_1000_p_scaffold_263_6

Organism: SCNPILOT_EXPT_750_P_Variovorax_66_42

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(5533..6480)

Top 3 Functional Annotations

Value Algorithm Source
pyruvate carboxyltransferase; K01640 hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] similarity KEGG
DB: KEGG
  • Identity: 94.9
  • Coverage: 315.0
  • Bit_score: 601
  • Evalue 1.60e-169
  • rbh
Pyruvate carboxyltransferase n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V8R7_VARPE similarity UNIREF
DB: UNIREF100
  • Identity: 94.9
  • Coverage: 315.0
  • Bit_score: 601
  • Evalue 5.10e-169
  • rbh
Pyruvate carboxyltransferase {ECO:0000313|EMBL:ADU36139.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.9
  • Coverage: 315.0
  • Bit_score: 601
  • Evalue 7.20e-169

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 948
TTGATTCACGCCTTCCTGCCGCCACGCGCGGTCGTCCGCGAAGTGGGCCTGCGCGACGGCCTGCAGAGCATCGCCCGCGTGCTGTCCACAGAACGCAAGCTCGAATGGATCCGCGACGCGCACGCGGCCGGCCAGCGCGAGATCGAGGTCGGTTCGTTCGTGCCCGCGCACCTGCTGCCGCAACTGGCCGACACCGCCGAACTGCTGGCCTATGCGAAGACGCTGCCGGGGATGTTCGCCTCGGTGCTGGTGCCCAACCTCAAGGGCGCCGAACGCGCCATCGCGGGCGAGGCCGACCTGATGATCGTGCCGCTGTCGGCCAGCCATGCGCACAGCCTCGCCAACCTGCGCAAGACGCCGGACGAAGTGGTCGCTGAAGTCGGCCGCATCCGCGCGGCGCGCGACGCGGCGGGCTCGAAGACGCTGATCGACGGCGGCGTGGGCACGGCCTTCGGCTGCACGCTGCAGGGCCATGTCGATCCCGACGAGGTGCTGCGGCTGATGCAGGCGCTGCTCGACGCCGGCGCCGACCGCGTGAGCCTGGCCGACACCGTCGGCTATGCCGATCCGGCGATGGTGCGCAGCCTGTTCGAGCGCGCGCTGCGCATCGCGGGCGACCGGCTGTGGTGCGGCCATTTCCACGACACGCGCGGCATGGGGCTCGCGAATGCGTATGCCGCGCTGGAAGTAGGCATCACGCGTTTCGACGCCTGCCTGGCCGGCATCGGCGGCTGCCCGCATGCGCCGGGTGCCAGCGGCAACGTCGACACGGAAGACCTGGTGTTCATGCTCCAGAGCATGGGCGTCGAGACCGGCGTCGACCTGCCGAAGCTGCTCGACCTGCGCCGCCGCGTGGCGGGCTGGCTCGAGGGCGAGACGCTGCAGGGCACGGTGTGGCGCGCCGGCTTTCCCAAGACCTTCGCGGCGGCCGAGGGAGTCGCGGCATGA
PROTEIN sequence
Length: 316
LIHAFLPPRAVVREVGLRDGLQSIARVLSTERKLEWIRDAHAAGQREIEVGSFVPAHLLPQLADTAELLAYAKTLPGMFASVLVPNLKGAERAIAGEADLMIVPLSASHAHSLANLRKTPDEVVAEVGRIRAARDAAGSKTLIDGGVGTAFGCTLQGHVDPDEVLRLMQALLDAGADRVSLADTVGYADPAMVRSLFERALRIAGDRLWCGHFHDTRGMGLANAYAALEVGITRFDACLAGIGGCPHAPGASGNVDTEDLVFMLQSMGVETGVDLPKLLDLRRRVAGWLEGETLQGTVWRAGFPKTFAAAEGVAA*