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SCNpilot_cont_1000_p_scaffold_263_10

Organism: SCNPILOT_EXPT_750_P_Variovorax_66_42

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(9264..9968)

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter related protein n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V8R2_VARPE similarity UNIREF
DB: UNIREF100
  • Identity: 97.4
  • Coverage: 234.0
  • Bit_score: 445
  • Evalue 4.60e-122
  • rbh
ABC transporter; K01996 branched-chain amino acid transport system ATP-binding protein similarity KEGG
DB: KEGG
  • Identity: 97.4
  • Coverage: 234.0
  • Bit_score: 445
  • Evalue 1.40e-122
  • rbh
Variovorax paradoxus strain MEDvA23 contig_20, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ33634.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.4
  • Coverage: 234.0
  • Bit_score: 445
  • Evalue 6.40e-122

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 705
ATGTCTGAGCTGCTGCGAATAGAAAACCTGAGCGCCGGCTACGGCGAGGCCGTGGTGCTGCACGACGTGGCCTTCACGCTCGGCGAGGGCCAGACGCTGGCGCTGCTGGGCCGCAACGGCACCGGCAAGACCACGCTGATCAACACGCTCGCGGGCGCGACGCGCCAGCACGGCGGCAGCATCGCGCTGGGCGGGCAGGCGCTGCACAAGCTGGCGCCGCACCAGCGCGCGGCGGCCGGCATCGGCTGGGTGCCGCAGGAGCGCAACATCTTCAAGTCGCTCACGGTGCACGAGAACCTCACGGCCGTGGAGCGGCCCGGCAAGTGGAATTCGCAGCGGGTCTACGAGATGTTCCCGCGCCTGGCGGAACGCAAGACCAACCTGGGCACGCAGCTGTCGGGCGGCGAGCAGCAGATGCTGGCCGTGGGCCGCGCGCTGGTGCTCAACCCCAAATTGCTGCTGCTCGACGAGCCGCTCGAGGGGCTCGCGCCCATCATCGTGGAAGAGCTGCTGCGCGCCATCCGCCGCATCACGCAGGACGAGGGGCTGGCCGCGATCATCGTGGAGCAGCATCCGCAGGCGATCCTCGCGATTTCCGACGAGGCGGTGGTGCTCGACCACGGCACCATCGTGCACACCGACTCGGCGGCGGCGTTGCGCGCCCAGCCGCAGGTGCTCGACCGGCTGCTGGGCGTCGCGCGCTGA
PROTEIN sequence
Length: 235
MSELLRIENLSAGYGEAVVLHDVAFTLGEGQTLALLGRNGTGKTTLINTLAGATRQHGGSIALGGQALHKLAPHQRAAAGIGWVPQERNIFKSLTVHENLTAVERPGKWNSQRVYEMFPRLAERKTNLGTQLSGGEQQMLAVGRALVLNPKLLLLDEPLEGLAPIIVEELLRAIRRITQDEGLAAIIVEQHPQAILAISDEAVVLDHGTIVHTDSAAALRAQPQVLDRLLGVAR*