ggKbase home page

SCNpilot_cont_1000_p_scaffold_263_11

Organism: SCNPILOT_EXPT_750_P_Variovorax_66_42

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(9961..10722)

Top 3 Functional Annotations

Value Algorithm Source
hemolysin III n=1 Tax=Variovorax paradoxus RepID=UPI00035FEC5F similarity UNIREF
DB: UNIREF100
  • Identity: 96.4
  • Coverage: 253.0
  • Bit_score: 484
  • Evalue 5.60e-134
  • rbh
ABC-type branched-chain amino acid transport system, ATPase component {ECO:0000313|EMBL:EJL77606.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.2
  • Coverage: 253.0
  • Bit_score: 483
  • Evalue 1.30e-133
putative branched-chain amino acid ABC transporter, ATP-binding protein similarity KEGG
DB: KEGG
  • Identity: 93.3
  • Coverage: 252.0
  • Bit_score: 465
  • Evalue 1.50e-128
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 762
ATGAGCGACACCGTGCTTTCCACCCACGGCCTGGTGATGCGCTTCGGCGGCATCACCGCCACCAACAACGTGACGATGGAGCTCAAGCGCGGCGCCCGCCATGCGCTGATCGGCCCCAACGGCGCGGGCAAGACCACGCTCATCAACCAGCTGACGGGCGTGCTCACGCCGACCGAAGGCCGCATCACGCTGCTGGGCGAAGACATCACGAAGCTCGCGCCGCACAAGCGCGTGGCGCGCGGCCTGGTGCGCACCTTCCAGATCAATCAGCTGTTCGACTCGATGACGCCGCTGGAGACGCTGGCGCTGGTGGTGTCGCAGCACCAGGGCGCGGGCGCGCAGTGGTGGCGCCCGCTCGGCGCCAGCAAGGCGATCACCGAGCGCGCGGCGCAACTGCTCGAGCAGTTCCACCTGAGCGACGTGGCCCGCCAGCAGGTCAAGCACCTGGCCTACGGCAAGCGCAGGCTGCTGGAAATCGCGATCGCCCTGGCCTGCGAGCCGCGCGTGCTGCTGCTCGACGAGCCGGTGGCGGGCGTGCCCGCCGGCGAGCGCGAAGAGCTGCTGCAGACCGTGGCCGCGCTGCCGGCCGACGTGTCGGTGCTGCTGATCGAACACGACATGGACCTGGTGTTCAGCTTTGCAGACCGCATGACCGTGCTGGTCAACGGCACGCTGCTGACCGAGGGCGACCCCGAAACCATCGCCAACGATCCCAAGGTGAAAGAGGTCTATCTGGGCCACGGAGAGGCCGCCCATGTCTGA
PROTEIN sequence
Length: 254
MSDTVLSTHGLVMRFGGITATNNVTMELKRGARHALIGPNGAGKTTLINQLTGVLTPTEGRITLLGEDITKLAPHKRVARGLVRTFQINQLFDSMTPLETLALVVSQHQGAGAQWWRPLGASKAITERAAQLLEQFHLSDVARQQVKHLAYGKRRLLEIAIALACEPRVLLLDEPVAGVPAGEREELLQTVAALPADVSVLLIEHDMDLVFSFADRMTVLVNGTLLTEGDPETIANDPKVKEVYLGHGEAAHV*