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SCNpilot_cont_1000_p_scaffold_263_14

Organism: SCNPILOT_EXPT_750_P_Variovorax_66_42

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(12733..13905)

Top 3 Functional Annotations

Value Algorithm Source
ABC-type branched-chain amino acid transport system, periplasmic component n=1 Tax=Variovorax sp. CF313 RepID=J2KX75_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 98.7
  • Coverage: 390.0
  • Bit_score: 750
  • Evalue 6.50e-214
  • rbh
ABC-type branched-chain amino acid transport system, periplasmic component {ECO:0000313|EMBL:EJL77603.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.7
  • Coverage: 390.0
  • Bit_score: 750
  • Evalue 9.10e-214
extracellular ligand-binding receptor; K01999 branched-chain amino acid transport system substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 92.6
  • Coverage: 394.0
  • Bit_score: 718
  • Evalue 8.60e-205
  • rbh

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1173
ATGCAAAGACGCCATCTCATCCAGACCGCAGCCCTGTCGGCGCTCGCGCTTTCAATGTCGCTGGCCAGTGCCCAGGACAACAAGTTCAAGATCGGCCTGATCCTGCCGATGACGGGCCAGTCGGCCTCCACCGGCCGCCAGATCGAAGCCGCCGCCCGCCTGTACATGGCCCAGAACGGCGACACCGTGGCCGGCAAGAAGGTCGAGCTGATCGTCAAGGACGACACCGGCCTGCCCGACGTCACCAAGCGCCTGGCGCAGGAACTGGTGGTGAACGACAAGGTCAACGTGCTGGCCGGCTTCGGCCTGACGCCCCTGGCACTCGCGGTGGCGCCCATCGCCACCCAGTCGAAGACGCCCGAAGTCGTGATGGCCGCCGCCACGTCGAGCATCACCGAGGCATCGCCCTACATCATCCGTTCGAGCTTCACGCTGCCGCAGGTGTCGGTGGCCATGGGCGACTGGGCGCCCAAGAACGGCGTGAAGACGGTCGTCACGCTGGTGGCCGACTACGGCCCCGGCAACGACGCAGAGAAGTTCTTCAGCGAGCGCTTCGTCCTCAACGGCGGCAAGGTGATCGAGAAGCTGCGCGTGCCGCTGCGCAACCCCGACTTCGCCCCGTTCCTGCAGAAGGTGCGCGACGCCAAGCCCGACGCGCTGTTCGTCTTCGTGCCCTCGGGCGCGGGCGCGGCCGTCATGAAGCAGTTCCTGGAGCGCGGCATGGACAAGGCCGGCATCAAGATGATCGCCACCGGCGACGTGACGGACGACGATCAACTCAACGACATGGGCGACGGCGCGCTGGGCGTGGTCACCTCGCACCACTACTCGGCCGCGCACCCGTCGGCAATGAACAAGAAGTTCGTCGAGGCCTTCGAGAAGGCCAACCCGAAGATGCGCCCCAACTTCATGGCCGTGGGCGGCTATGACGGCATGCGCGTGATCTACGAAGCGCTCAAGACCACCAAGGGCCAGGGCGGCGGCGAAGCGCTGCTGGCGGCCATGAAGGGCCAGGTCTTCGAGAGCCCGCGCGGCCAGGTGCTGATCGACGCGCAGACGCGCGACATCGTGCAGGACGTGTACCTGCGCAAGGTCGAGAAGAAGGACGGCCAACTCTACAACGTCGAGTTCGACGTCATCAAGAGCGTCAAGGATCCGGGCAAGGCAAAATAA
PROTEIN sequence
Length: 391
MQRRHLIQTAALSALALSMSLASAQDNKFKIGLILPMTGQSASTGRQIEAAARLYMAQNGDTVAGKKVELIVKDDTGLPDVTKRLAQELVVNDKVNVLAGFGLTPLALAVAPIATQSKTPEVVMAAATSSITEASPYIIRSSFTLPQVSVAMGDWAPKNGVKTVVTLVADYGPGNDAEKFFSERFVLNGGKVIEKLRVPLRNPDFAPFLQKVRDAKPDALFVFVPSGAGAAVMKQFLERGMDKAGIKMIATGDVTDDDQLNDMGDGALGVVTSHHYSAAHPSAMNKKFVEAFEKANPKMRPNFMAVGGYDGMRVIYEALKTTKGQGGGEALLAAMKGQVFESPRGQVLIDAQTRDIVQDVYLRKVEKKDGQLYNVEFDVIKSVKDPGKAK*