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SCNpilot_cont_1000_p_scaffold_263_15

Organism: SCNPILOT_EXPT_750_P_Variovorax_66_42

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(14072..15058)

Top 3 Functional Annotations

Value Algorithm Source
oxidoreductase FAD-binding protein; K03863 vanillate monooxygenase [EC:1.14.13.82] similarity KEGG
DB: KEGG
  • Identity: 88.1
  • Coverage: 328.0
  • Bit_score: 588
  • Evalue 1.50e-165
  • rbh
diguanylate cyclase n=1 Tax=Variovorax paradoxus RepID=UPI00036DD1CE similarity UNIREF
DB: UNIREF100
  • Identity: 90.3
  • Coverage: 329.0
  • Bit_score: 600
  • Evalue 1.20e-168
  • rbh
Variovorax paradoxus strain MEDvA23 contig_20, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ33639.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.6
  • Coverage: 328.0
  • Bit_score: 599
  • Evalue 3.70e-168

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 987
ATGAAAAGCGATCTTCAATGGATGCAGGCGCAGGTCGTCGCGCTGCGCGACGTGACGCCCACCGTGCGCGAGTTCGAACTGCGCCCCGACGACGGCTTCGCCGGCGCCTATGAACCCGGCGCCCATCTGCAGGTGCAGGTGATGACGGCGCAGGGCAAGCTGCAGACCCGCTCCTACTCGCTGGTCGGCGAGGGCGACGGCCGCTGCTGGCGCATCGCCGTCAAGCGGCTGGACGACGGCCGTGGCGGATCGCTCGCGATGTGGCGGCTGGTCGAGGGCGACCGGCTGCAGGTCAGCGCGCCGCAAAACCACTTTGCGCTCGACATGTCCGCGCCCGGCTACCTGCTGGTGGCGGGCGGCACCGGCATCACGCCGCTGGTGCTGATGGCGCAGCGGCTGGGCGAGCACGCCAGGCGCGCCAGCGTGCCGGTGAAGATGCTCTACGGCGCGCGCAATGCCGACGAATTCGGCTACCTCGCGCATCTGCGCGAAGCGCTGGGCGAGCACGTGGAGGCGCATGAAGGCTCGGCGCCCATCGACTTCGCCGCCGCCATCGCCGCGCTGCCGCCCGGCGGGCAGCTCTACACCTGCGGCCCGGTGCCGATGCTCGAGGCGCTCAAGCGCGCCTGGCATGCGGCGGGCCGTCCCATCGAGGACCTGCGCTTCGAGACCTTCGGCAGCAGCGGCCGGCTGGCCACGCAGGCGTTCCAGGTGCGCATTCCGCGCCACGACCTCGCCATCACGGTGCCTGCCGACTGCACGCTGCTGGAGGCGCTGGACGCCGCCGGCGTGCAGACGCTGTGGGACTGCAAGCGCGGCGAGTGCGGCCTGTGCGCCATGGACGTGATTGCCGTCGACGGCGAGGTCGACCACCGCGACGTGTTCCTCAGCGAGCACGAAAAAGCAGCGGCCACGCGCATCTGCGCCTGCGTGTCACGCGCGGTGGGTACGCTCACGCTCGACTCCGCCTATCGCGCCGACAGCTGA
PROTEIN sequence
Length: 329
MKSDLQWMQAQVVALRDVTPTVREFELRPDDGFAGAYEPGAHLQVQVMTAQGKLQTRSYSLVGEGDGRCWRIAVKRLDDGRGGSLAMWRLVEGDRLQVSAPQNHFALDMSAPGYLLVAGGTGITPLVLMAQRLGEHARRASVPVKMLYGARNADEFGYLAHLREALGEHVEAHEGSAPIDFAAAIAALPPGGQLYTCGPVPMLEALKRAWHAAGRPIEDLRFETFGSSGRLATQAFQVRIPRHDLAITVPADCTLLEALDAAGVQTLWDCKRGECGLCAMDVIAVDGEVDHRDVFLSEHEKAAATRICACVSRAVGTLTLDSAYRADS*