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SCNpilot_cont_1000_p_scaffold_263_16

Organism: SCNPILOT_EXPT_750_P_Variovorax_66_42

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(15100..15882)

Top 3 Functional Annotations

Value Algorithm Source
GntR family transcriptional regulator n=1 Tax=Variovorax paradoxus RepID=UPI00036E5ABA similarity UNIREF
DB: UNIREF100
  • Identity: 95.8
  • Coverage: 260.0
  • Bit_score: 477
  • Evalue 7.10e-132
  • rbh
GntR family transcriptional regulator; K11475 GntR family transcriptional regulator, vanillate catabolism transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 95.0
  • Coverage: 260.0
  • Bit_score: 471
  • Evalue 2.10e-130
  • rbh
Transcriptional regulator, GntR family {ECO:0000313|EMBL:ADU36128.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.0
  • Coverage: 260.0
  • Bit_score: 471
  • Evalue 9.30e-130

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 783
ATGAGGGCCGCCGTGGTTTCTTCCGCCGCGGAACAACAGCCAGCCGACAGCGGCAGCTCGCAGGCCGTGAAGGCGCAGTTGCGGCTGCGCGAGATGATCCTGGCGGGCGATCTGCCCGGCGGCGCGCGCATTGCCGAAGTGGCCATCTCCGAGCAGCTCGGCGTGTCGCGCACGCCGGTGCGCACGGCGCTGATGCGGCTCGAGCAGGAGGGCCTGCTCGAAGCGCTGCCCAACGGCGGCTATGCGGTGCGCACTTTTTCCGAGCGCGACGTGGCCGACGCCATCGAGCTGCGCGGCACGCTCGAAGGCCTGGTGGCCCGGCTCGCGGCCGAGCGCGGCGCGGCGCCCGTGGTGCTGCGCGAAGCGCGCGCCTGCCTGCAGCGCATCGACGAACTGCTGCGCGAGCCGGCGCTGGACGACGCCGCCTTCTCGCGCTACGTGACGCACAACGAGCGCTTCCATGCGCTGCTGTGCGAAATGGCGGGCAGCCCGGTCATTGCGCAGCAGCTGGAGCGGGTGGTCAACCTGCCGTTCGCGTCGCCCTCGGGCTTCGTCATCGTGCAGGCCAATTCGCCCGCCGCGCGCGACATGCTGGTGATCGCGCAGGACCAGCACGTCCAGGTGCTCGACGCCATCGAGTCCGGCGAAGGCTCGCGCGCCGAGGCGCTGATGCGTGAGCACAGCCGCATCGCGCGTCGCAACCTGCGCGAGGCGCTGCACGGCACGCCAACCGCCGAGCAGCGTCCGCTGCCGGGCGTGCAGCTCATTCGCCGGCGCGGCTGA
PROTEIN sequence
Length: 261
MRAAVVSSAAEQQPADSGSSQAVKAQLRLREMILAGDLPGGARIAEVAISEQLGVSRTPVRTALMRLEQEGLLEALPNGGYAVRTFSERDVADAIELRGTLEGLVARLAAERGAAPVVLREARACLQRIDELLREPALDDAAFSRYVTHNERFHALLCEMAGSPVIAQQLERVVNLPFASPSGFVIVQANSPAARDMLVIAQDQHVQVLDAIESGEGSRAEALMREHSRIARRNLREALHGTPTAEQRPLPGVQLIRRRG*