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SCNpilot_cont_1000_p_scaffold_263_18

Organism: SCNPILOT_EXPT_750_P_Variovorax_66_42

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 17144..18265

Top 3 Functional Annotations

Value Algorithm Source
methionine synthase vitamin-b12 independent; K00549 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] similarity KEGG
DB: KEGG
  • Identity: 97.3
  • Coverage: 373.0
  • Bit_score: 735
  • Evalue 6.50e-210
  • rbh
5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase n=1 Tax=Variovorax paradoxus RepID=UPI00036C4507 similarity UNIREF
DB: UNIREF100
  • Identity: 98.4
  • Coverage: 373.0
  • Bit_score: 744
  • Evalue 5.80e-212
  • rbh
Variovorax paradoxus strain MEDvA23 contig_20, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ33642.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.3
  • Coverage: 373.0
  • Bit_score: 735
  • Evalue 2.90e-209

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1122
ATGTCACAGCACGCCGCCCTGCCCGCCCGCTTCGACCACGTGGGCAGTTTCCTGCGCCCCAAATACCTGCTCGAAGCGCGCGAGCAGAAGGCCAAGGGCGAGATCACGCCCGAACAGCTTCGCCTGGTCGAAGACAAGGCCATCGCCGAGATCGTCAAGTTCCAGGAAGACATCGGCCTGAAGAGCATCACCGACGGCGAATTCCGCCGCACCTATTTCCACATCGACTTCCTCGACCAGCTCGGTGGCGTGAAGACCGACATCCCGGTCACCATCCGCAAGCCCGACGGCACCGAGGAACTCGCGCCGCCCGCGATGCGCGTGATCGACAAGGTCCGCCACGTCAAGGACATCCAGCTTGCCGACTTCCAGTACCTCAGGAGCCAGGTGTCGGCGGGCAACACGCCCAAGGTGACGATCCCTTCGCCCACCATGCTGCACTTCCGCGGCGGCCGCGCCGGCATCAGCAAGGACGCCTACCCCGAGCTCGACCCGGCGTTCTACGACGACGTGGCCAAGGCCTATGGCGACGAACTGCGCTCGCTGGCCGCCGCCGGCTGCACCTACGTGCAGATGGACGACACCAACCTCGCCTACCTGTGCGACGAGCACATGCGCGAAGCCGCCCGCAAGCGCGGCGACGACCCGAACGAGCTGCCGCACCGCTACGCCGCCTTCATCAACAAGGTGGTCGCGCAGAAGCCGCCGGGCATGCTGCTGGCCATGCACCTGTGCCGCGGCAACTTCAAGAGCACGCACGCCGCCGCCGGCAACTACGAGCCCGTGGCCGAGGCGCTGCTCAAGGAGATGGACCTGGACGCCTACTTCATGGAGTACGACGACGCGCGCTCGGGCGACTTCAAGCCGCTGCGCTACCTGCCCAAGGGCAAGACGGTGGTGCTCGGCCTGGTGACCACCAAGTTCGGCGAGATGGAAGACAAGGACGAACTCAAGCGCCGCATCGAGGACGCCGCCAAGTACGCCTCGCTCGACCAGCTCGCGCTGTCGCCGCAGTGCGGCTTCTCCAGCACCGTGCACGGCAACAACATCGCGGTGGAAGCGCAGCGCAACAAGCTGCGCCTGGTGATCGAGACCGCGCAGGAAGTCTGGGGCTCGACCTGA
PROTEIN sequence
Length: 374
MSQHAALPARFDHVGSFLRPKYLLEAREQKAKGEITPEQLRLVEDKAIAEIVKFQEDIGLKSITDGEFRRTYFHIDFLDQLGGVKTDIPVTIRKPDGTEELAPPAMRVIDKVRHVKDIQLADFQYLRSQVSAGNTPKVTIPSPTMLHFRGGRAGISKDAYPELDPAFYDDVAKAYGDELRSLAAAGCTYVQMDDTNLAYLCDEHMREAARKRGDDPNELPHRYAAFINKVVAQKPPGMLLAMHLCRGNFKSTHAAAGNYEPVAEALLKEMDLDAYFMEYDDARSGDFKPLRYLPKGKTVVLGLVTTKFGEMEDKDELKRRIEDAAKYASLDQLALSPQCGFSSTVHGNNIAVEAQRNKLRLVIETAQEVWGST*