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SCNpilot_cont_1000_p_scaffold_350_30

Organism: SCNPILOT_EXPT_750_P_Variovorax_66_42

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(31943..33148)

Top 3 Functional Annotations

Value Algorithm Source
Extracellular ligand-binding receptor n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TX90_TISMK similarity UNIREF
DB: UNIREF100
  • Identity: 43.5
  • Coverage: 405.0
  • Bit_score: 335
  • Evalue 8.70e-89
livK; extracellular ligand-binding receptor similarity KEGG
DB: KEGG
  • Identity: 43.5
  • Coverage: 405.0
  • Bit_score: 335
  • Evalue 2.70e-89
Extracellular ligand-binding receptor {ECO:0000313|EMBL:AFK57378.1}; TaxID=1110502 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Tistrella.;" source="Tistrella mobilis (strain KA081020-065).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 43.5
  • Coverage: 405.0
  • Bit_score: 335
  • Evalue 1.20e-88

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Taxonomy

Tistrella mobilis → Tistrella → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1206
ATGACCGACTTCATCCGACGCAAGCTGATGCAGGGCATCGGCGCCGCCGCCACCATCGGCCCCTTCGCGGGCGGGGCCGCGTTCGCGCAGGCGCACAAGGGCGACATCGTGGTCGGCGCGGCCCAGCCCATCACCGGTGTCTTCGCCTTCGCGGGGTTGGCCATGAACAATGGCCTGGCCGACTACATCGACTGGAAGAACGCCAACGGCGGCATCGCCGGCCACAAGCTGCGCTACGTGGCCGAAGACAGCGGCTTCAAGGTCGACCAGTCGGCCGCCATCTTCAAGAAGATCATGGCCAGCGAGAAGCCCTCGTTCTTCTACTGCGACGGCACTCCGTCGGTGAAGGCCGTGGCGCAGGACGCCATTGCGTCGAACCACGTGATGACCTCGTCGACCTCGCTCGCCATTTCGGTGGCCGATCCGGTGAAGATGCCGCACCACTTCGTGCCCGGTGCCACGTATCCGCGGCTGCATGAAATCCTGATGGAGCACATTGCGCGCACTTCGCAAGGCGCCGCCGCCAAGCCGCGCATCGCCTACGTTTACGCAGACACCGAGTTCGGCCGCGACGGCATCCCCGGCGGCAAGGCGCGCGCCGAGAAGCTGGGCCTGCCCATCGTGGCCGAGATCGTCACCAAGCAGTCGGGCGTGGACGTGACCACCGAGGTGGCGCAGCTGCGCCGGGCCAAGCCCGACATCGTGATATTCCAGGGCTACATCCTCGCGCCCATGCCCGAGTTCGTGCGCCAGATGCGCGAGGCCGGGCTCAACCCGCAGATCATGGGCACCGCCTGGGGCCTCGACAAGCCCGCCTACGACGCACTGGCCGCGCTGGGCGTGCGCCTCACGGGCGTGAGCATGTACCGTTACGGCCACGAGACCGATTCGCCCATGATCAAGGCCATGCGCGACCACGCGGCCAAGGCCCGGCCCGACATGAAGTTCATCTCGCCCTTCTACGTGTCGAGCTGGCTGTCGGGCATGGTGTTCGGCGAAATCGCCGAGCGCTGCCTGAAGGCCAACAAGCCGCTGGTGCTGCCCAACATGAAGGCGGCGCTGGAGTCGATGAAGGACTGGGACAGCGGCGGCGTCTCGGGCCTGCTGGTGGACATCAGCAGCCATCAGATCCCGGCCGGGCGCATGTACGCCTACGACCCCGACAAGAAGACGATGGAACCGGCCGGCTCGTGGATCAAGGTGTGA
PROTEIN sequence
Length: 402
MTDFIRRKLMQGIGAAATIGPFAGGAAFAQAHKGDIVVGAAQPITGVFAFAGLAMNNGLADYIDWKNANGGIAGHKLRYVAEDSGFKVDQSAAIFKKIMASEKPSFFYCDGTPSVKAVAQDAIASNHVMTSSTSLAISVADPVKMPHHFVPGATYPRLHEILMEHIARTSQGAAAKPRIAYVYADTEFGRDGIPGGKARAEKLGLPIVAEIVTKQSGVDVTTEVAQLRRAKPDIVIFQGYILAPMPEFVRQMREAGLNPQIMGTAWGLDKPAYDALAALGVRLTGVSMYRYGHETDSPMIKAMRDHAAKARPDMKFISPFYVSSWLSGMVFGEIAERCLKANKPLVLPNMKAALESMKDWDSGGVSGLLVDISSHQIPAGRMYAYDPDKKTMEPAGSWIKV*