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SCNpilot_cont_1000_p_scaffold_356_13

Organism: SCNPILOT_EXPT_750_P_Variovorax_66_42

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(14798..15511)

Top 3 Functional Annotations

Value Algorithm Source
phage-shock protein n=1 Tax=Variovorax paradoxus RepID=UPI000365B1C1 similarity UNIREF
DB: UNIREF100
  • Identity: 94.1
  • Coverage: 236.0
  • Bit_score: 419
  • Evalue 2.10e-114
  • rbh
Variovorax paradoxus strain MEDvA23 contig_28, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ32094.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.7
  • Coverage: 237.0
  • Bit_score: 422
  • Evalue 4.50e-115
phage shock protein PspA similarity KEGG
DB: KEGG
  • Identity: 92.4
  • Coverage: 237.0
  • Bit_score: 416
  • Evalue 4.30e-114
  • rbh

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 714
ATGACAGTCATCAAGAAGCTCGTCACCCTGCTGCGCGGCAGCGCGCGCGAAATCGGCGAGAGCGTGGTCGACAGCAATGCGACGCGCATCTACGAGCAGGAAATCATCGACGCCAAGCACAGCATCGAGAAGGCCAAGGGCGATCTCACCGGCGTGATGGCCAAGGAGATGCAGTCGGCCCGCGAGATCGAGCGGCTCAAGAACGAAGCCGCACGCTACGAAGGCCTGGCGCTCGAAGCCCTCAACAAGACGCAGGAAGGCCTGGCGCTCGACGTGGCGGCCAAGGTGGGCCTGCTGGAGCAGGAACTCGAGGAACAGGCCAAGGCGCATGCCTCGTATGCGCTGCAGGTGTCCCGGCTGAAGGAGCTCATCAAGTCGGCCGAAGCGCGCATTCGCGAGCACGAGCGCGAGATCGGCATCGCCAAGACCACCGAGAGCGTCTACCGCGCCACGCAGTCCATCTCCGAGAACATCGGCAGCGGCGGCTCGCGGCTGGCCAATGCGCGCGAATCGCTGGAGCGCATCCGCGCGCGCCACGAAGACCTGTCCGACCGCATGACGGCCAGCCAGCAGCTCGAGAACGAGTTCGGCCACGGCGCGCTCGAGAAGAAGCTCGCCGCCGCGGGCATCGGCAACGAGGCAGACCGCACCGGCAAGGTGATGGACCGCATCCGCGCCCGCCAGGCCAACCCCTCGGGGACCGGAGCGCAATAA
PROTEIN sequence
Length: 238
MTVIKKLVTLLRGSAREIGESVVDSNATRIYEQEIIDAKHSIEKAKGDLTGVMAKEMQSAREIERLKNEAARYEGLALEALNKTQEGLALDVAAKVGLLEQELEEQAKAHASYALQVSRLKELIKSAEARIREHEREIGIAKTTESVYRATQSISENIGSGGSRLANARESLERIRARHEDLSDRMTASQQLENEFGHGALEKKLAAAGIGNEADRTGKVMDRIRARQANPSGTGAQ*