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SCNpilot_cont_1000_p_scaffold_376_2

Organism: SCNPILOT_EXPT_750_P_Variovorax_66_42

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 1968..2504

Top 3 Functional Annotations

Value Algorithm Source
isochorismatase n=1 Tax=Variovorax paradoxus RepID=UPI00036B0B5D similarity UNIREF
DB: UNIREF100
  • Identity: 88.8
  • Coverage: 178.0
  • Bit_score: 328
  • Evalue 4.80e-87
  • rbh
Nicotinamidase-like amidase {ECO:0000313|EMBL:EJL72360.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.8
  • Coverage: 176.0
  • Bit_score: 322
  • Evalue 2.80e-85
isochorismatase family protein similarity KEGG
DB: KEGG
  • Identity: 85.8
  • Coverage: 176.0
  • Bit_score: 306
  • Evalue 4.70e-81
  • rbh

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 537
ATGAAAACAGCCGCCCTCGTCATCGATGTGCAGCGCGGTCTCTGCGACGACCCGCCGCGTCCCCATGAAGCCGCCGAAGTGGTGCGGCGCATCAACGCGCTCACCGCCAGGGCGCGCGCGGCCGGCGTGCCGGTGGCGTTCATCCAGCACGAGAACGCGGTCGACCTGGTGTTCGACTCCGAGCGCTGGCAGCTCGTCGGCGCGCTGGACACCGACTCGCGCGACGCCAAGCTGCGCAAGACCACGCCCGATTCGTTCCTGCGCACGCCGCTCGACGCATGGCTGTCGGAGCATGCGGTGAAGCGCGTGGTCGTGTGCGGCTATTCGTCGGAGTTCTGCGTCGACACCACCGTGCGCCGCGCCGCCGCGCTGGGCTACGAGGTGGTGCTCGCGGCCGATGCGCACACCTCGCACGACAAGCCGCATGCCACCGGCGCGCAGATCCGCGCGCACCACAACGCCACGCTCTCGGACATCACCAGCTTCGGCGTGCCGATACGCGCGGTGGCCAGTTCGGACATCGCATTCGGCGATTGA
PROTEIN sequence
Length: 179
MKTAALVIDVQRGLCDDPPRPHEAAEVVRRINALTARARAAGVPVAFIQHENAVDLVFDSERWQLVGALDTDSRDAKLRKTTPDSFLRTPLDAWLSEHAVKRVVVCGYSSEFCVDTTVRRAAALGYEVVLAADAHTSHDKPHATGAQIRAHHNATLSDITSFGVPIRAVASSDIAFGD*