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SCNpilot_cont_1000_p_scaffold_376_7

Organism: SCNPILOT_EXPT_750_P_Variovorax_66_42

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 6384..7037

Top 3 Functional Annotations

Value Algorithm Source
Amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family n=1 Tax=Variovorax sp. CF313 RepID=J2T2V3_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 96.3
  • Coverage: 217.0
  • Bit_score: 412
  • Evalue 3.00e-112
  • rbh
Amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family {ECO:0000313|EMBL:EJL72357.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.3
  • Coverage: 217.0
  • Bit_score: 412
  • Evalue 4.30e-112
putative amino acid ABC transporter, permease protein similarity KEGG
DB: KEGG
  • Identity: 96.3
  • Coverage: 217.0
  • Bit_score: 411
  • Evalue 2.10e-112
  • rbh

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 654
ATGCGTACCTTCGGTTTTCCCGAATTCCTTTTCATCCTCGAAGCGGCCAAGTGGACGCTCGCGCTGTCGGCCATCGCCTTCGTGGGCGGCGCGATCCTGGGGTTGGCCATCGCGCTGATGCGCACGTCGGAATCGACGTGGGCGCGCGGCATCTCGACCACCTTCATCCAGATCTTCCAGGGCACGCCGCTGCTGCTGCAGCTGTTCCTGGTGTTCTTCGGCGCGCCGGTGCTGGGGCTGGACATCAACCCGTGGGTGGCGGCCGGCGTGGCACTCATCCTGAACAGCGCCGCCTTCCTCGGCGAGATCTGGCGCGGCTGCATCGAGGCCATTCCGCGTGGCCAGTGGGAAGCGGCCGAGGCGCTGAGCCTCAAGTACACCTCCCGCATGCGCGACGTGGTGCTGCCGCAGGCCTTCAAGATCGCGCTCGCGCCCACCGTGGGCTACGTGGTGCAGATCATCAAGGGCACCTCGCTCGCGGCCATCATCGGCTTCGTCGAGGTGACGCGCGCCGGGCAGATCGTCAACAACGCCACCTTCCAGCCGCTCATCGTGTTCTCGGTGGTGGCTGCCATCTACTTCGTGATCTGCTGGCCGCTCTCTTTGCTGGCCGCGCGCATGGAGCGCAAGCGCGCCCGCGCGCTGGCCCGCTGA
PROTEIN sequence
Length: 218
MRTFGFPEFLFILEAAKWTLALSAIAFVGGAILGLAIALMRTSESTWARGISTTFIQIFQGTPLLLQLFLVFFGAPVLGLDINPWVAAGVALILNSAAFLGEIWRGCIEAIPRGQWEAAEALSLKYTSRMRDVVLPQAFKIALAPTVGYVVQIIKGTSLAAIIGFVEVTRAGQIVNNATFQPLIVFSVVAAIYFVICWPLSLLAARMERKRARALAR*