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SCNpilot_cont_1000_p_scaffold_376_8

Organism: SCNPILOT_EXPT_750_P_Variovorax_66_42

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 7097..7894

Top 3 Functional Annotations

Value Algorithm Source
Extracellular solute-binding protein family 3 n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6UUY8_VARPE similarity UNIREF
DB: UNIREF100
  • Identity: 97.0
  • Coverage: 265.0
  • Bit_score: 503
  • Evalue 1.60e-139
  • rbh
family 3 extracellular solute-binding protein; K02030 polar amino acid transport system substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 97.0
  • Coverage: 265.0
  • Bit_score: 503
  • Evalue 5.00e-140
  • rbh
Variovorax paradoxus strain MEDvA23 contig_30, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ31697.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.0
  • Coverage: 265.0
  • Bit_score: 503
  • Evalue 2.20e-139

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 798
ATGACCCGTACCACCACCCGCCGCGCGGCGATCGCAGCCCTGGGGCTCGGCGCCGCCCTGACCGTGTTCGCTCCCTTCGCTTGCGCGCAGAGCGTGGCCGACATCAAGAAGAAGGGCGAGATCACCATCGGCATGCTGGTCGACTTTCCGCCCTACGGCACCACCGACGCCAAGAACCAGCCCGACGGCTACGACGCCGACGTGGCCAAGCTGCTGGCCAAGGACTGGGGCGTGAAAGCCAACATCGTGCCGGTGACCGGCCCGAACCGCATTCCCTTCCTGCTGACCAACAAGGTCGACCTGCTGGTGGCTTCGCTGGCCATCACGCCCGAGCGCGCCAAGCAGGTGCAGTTCTCGCAGCCCTACGCTGCCGCGACCATCGTGCTGTACGGCGCGAGCAAGACGCCCATCAAGGCAGCGGCCGACCTGAAGGGCCTGCGCGTGGGCGTGGCCCGTGCGTCCACGCAAGACGTGGCCGTGACCAAGGCCGCGCCGGAAGGCACTGAAATCCGCCGCTTCGACGACGACGCTTCGGCCATGCAGGCGCTGATCTCCGGCCAGGTCGATGCCATCGGCTGCTCGGTGACCGTCGCCGCGCAGATCGCCAAGCGCGTGCCCGCCAACACCTACGAAAACAAGTTCACGCTGGTGCAGCAGTCGATGGGCATCGCGATGCGCCCCGGCCAGGAAGAGCTGACCAAGGCGGTGAACGAGTTCGTGCAGAAGAACACTGCCAACGGCGAGCTGAACAAGCTGTATCAAAAGTGGCTGCAGGTCGACCTGCCCAAGATGCAGTAA
PROTEIN sequence
Length: 266
MTRTTTRRAAIAALGLGAALTVFAPFACAQSVADIKKKGEITIGMLVDFPPYGTTDAKNQPDGYDADVAKLLAKDWGVKANIVPVTGPNRIPFLLTNKVDLLVASLAITPERAKQVQFSQPYAAATIVLYGASKTPIKAAADLKGLRVGVARASTQDVAVTKAAPEGTEIRRFDDDASAMQALISGQVDAIGCSVTVAAQIAKRVPANTYENKFTLVQQSMGIAMRPGQEELTKAVNEFVQKNTANGELNKLYQKWLQVDLPKMQ*