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SCNpilot_cont_1000_p_scaffold_376_9

Organism: SCNPILOT_EXPT_750_P_Variovorax_66_42

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 7931..8686

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter; K02028 polar amino acid transport system ATP-binding protein [EC:3.6.3.21] similarity KEGG
DB: KEGG
  • Identity: 97.6
  • Coverage: 251.0
  • Bit_score: 490
  • Evalue 2.50e-136
  • rbh
ABC transporter related protein n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6UUY9_VARPE similarity UNIREF
DB: UNIREF100
  • Identity: 97.6
  • Coverage: 251.0
  • Bit_score: 490
  • Evalue 7.80e-136
  • rbh
ABC transporter related protein {ECO:0000313|EMBL:ADU36404.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.6
  • Coverage: 251.0
  • Bit_score: 490
  • Evalue 1.10e-135

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 756
ATGACGACGGAATCGATCATCCGCATGGAAGCGGTCAACAAGTGGTACGGTGAATTCCAGGTGTTGACCGGCATCGACCTGTCGGTGCGCCAGGGCGAGCGCATCGTGATCTGCGGGCCCTCGGGCTCGGGCAAGTCGACGCTGATCCGCTGCATCAACCGGCTCGAGACGGTGCAGAAGGGCCGCATCGTGGTCGACGGCATCGACCTCACGGCCGGCGGCAAGAACATCGACGCGGTGCGTGCCGAGGTGGGCATGGTGTTCCAGCAGTTCAACCTGTTTCCGCATCTCACCATCCTGGAGAACTGCACGCTCGCGCCGAAGCGCTCGCGCGGCATGACCAAGGCGCAGGCCGAGGAAATTGCCATGAAGTACCTCACGCGGGTGCGCATTCCCGAGCAGGCCAACAAGTACCCGAGTCAGCTCTCCGGCGGCCAGCAGCAGCGCGTGGCCATTGCGCGCGCGCTGTGCATGACGCCGAAGATCATGCTGTTCGACGAGCCCACCTCCGCGCTCGACCCCGAGATGGTCAAGGAAGTGCTCGACACCATGATCGGCCTGGCCGAAGACGGCATGACCATGCTGTGCGTGACGCACGAAATGGGCTTCGCCCGCAGCGTGGCCGACCGCGTGATCTTCATGGCCGAAGGCAAGATCGTGGAGCAGGCGCCGCCCGAGGAGTTCTTCGGCAACCCGAAGGACGAGCGCACGCGCCAGTTCCTCGGCCAGATCCTGAGTTCGCACCAAGGCCACTGA
PROTEIN sequence
Length: 252
MTTESIIRMEAVNKWYGEFQVLTGIDLSVRQGERIVICGPSGSGKSTLIRCINRLETVQKGRIVVDGIDLTAGGKNIDAVRAEVGMVFQQFNLFPHLTILENCTLAPKRSRGMTKAQAEEIAMKYLTRVRIPEQANKYPSQLSGGQQQRVAIARALCMTPKIMLFDEPTSALDPEMVKEVLDTMIGLAEDGMTMLCVTHEMGFARSVADRVIFMAEGKIVEQAPPEEFFGNPKDERTRQFLGQILSSHQGH*