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SCNpilot_cont_1000_p_scaffold_376_12

Organism: SCNPILOT_EXPT_750_P_Variovorax_66_42

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 10414..11397

Top 3 Functional Annotations

Value Algorithm Source
Variovorax paradoxus strain MEDvA23 contig_30, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ31693.1}; EC=1.1.1.79 {ECO:0000313|EMBL:KIQ31693.1};; EC=1.1.1.81 {ECO:0000313|EMBL:KIQ31693.1};; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.7
  • Coverage: 327.0
  • Bit_score: 615
  • Evalue 3.80e-173
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein; K00090 gluconate 2-dehydrogenase [EC:1.1.1.215] similarity KEGG
DB: KEGG
  • Identity: 94.5
  • Coverage: 327.0
  • Bit_score: 612
  • Evalue 9.50e-173
  • rbh
Lactate dehydrogenase-like oxidoreductase n=1 Tax=Variovorax sp. CF313 RepID=J2K624_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 95.7
  • Coverage: 326.0
  • Bit_score: 614
  • Evalue 4.70e-173
  • rbh

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 984
ATGACGCAGCAGAAGAACATCCTCGTCTTCAGGCCGCTGCCCGAAGACCAGCTCGCGCGCCTGCAGGCTGCGCACCATGTGACAGTGGCCGACCCGCGCAAGGAGCCCGAGGCCTTCGCCGCCGCGCTGCGCACCGCGGACGGCCTGATCGGCTCCAGCCATCCGGTCGATGCCGCGCTGCTCGACGCGGCGCCGCAGCTGCAGGTGATTTCGAGCGTGTCCGTGGGCGTCGACAACTATCCGCTGGCCGAACTGCGCAAGCGCGGCATCGTGCTGTGCCACACGCCCGACGTGCTGACCGAGACCGTGGCCGACACGGTGTTCGCGATTCTCATGGCCACGCAGCGCCGCGTGGTCGAGTTGTCGAACCTGGTGCGCGAAGGCCGCTGGACCAAGAACATCGGCGAAGAGCTCTTCGGCACCGACGTGCACGGCAAGACGCTGGGCATCCTCGGCTTCGGCCGCATCGGGCAGGCCGTGGCGCGCCGCGCCGCCCTGGGCTTCGGCATGCCGGTGCTGTACCACTCGCGCCGCCCGGTCGACCTGGCGGCGCAGGCACCCGAGTTGCAGGGCCGCGCCGCGCACACGCCGCTGGACGACCTGCTGGCGCGCGCCGACATCGTGCTCGCGATGCTGCCGCTGACCGACGCCACGCGCGGCATGATCGACGCCGCCTTCTTCGCGCGCATGAAGCCCGGCGCGGCTTTCATCAACGGCGGCCGCGGCGCCACGGTGAATGAAGAAGCGCTGCTGAACGCGCTCGACCACGGCACGCTGCGCGCCGCCGGGCTCGACGTGTTCGCCAAGGAGCCGCTGCCGGCCGATTCGCCGCTGCGCACCCATCCGCGCGTGACGCCGCTGCCGCACATCGGCTCGGCCACGCACGAGACGCGCCACGCCATGGCCGAGCTGGCGACAACCAATCTGCTGCAGGTGCTGGCGGGCGAGAAGCCGACGGCGCCGTACGACACGGCAAGCGCATGA
PROTEIN sequence
Length: 328
MTQQKNILVFRPLPEDQLARLQAAHHVTVADPRKEPEAFAAALRTADGLIGSSHPVDAALLDAAPQLQVISSVSVGVDNYPLAELRKRGIVLCHTPDVLTETVADTVFAILMATQRRVVELSNLVREGRWTKNIGEELFGTDVHGKTLGILGFGRIGQAVARRAALGFGMPVLYHSRRPVDLAAQAPELQGRAAHTPLDDLLARADIVLAMLPLTDATRGMIDAAFFARMKPGAAFINGGRGATVNEEALLNALDHGTLRAAGLDVFAKEPLPADSPLRTHPRVTPLPHIGSATHETRHAMAELATTNLLQVLAGEKPTAPYDTASA*