ggKbase home page

SCNpilot_cont_1000_p_scaffold_376_16

Organism: SCNPILOT_EXPT_750_P_Variovorax_66_42

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 16007..16654

Top 3 Functional Annotations

Value Algorithm Source
DNA-binding response regulator, LuxR family n=1 Tax=Janthinobacterium sp. (strain Marseille) RepID=A6SW03_JANMA similarity UNIREF
DB: UNIREF100
  • Identity: 55.4
  • Coverage: 222.0
  • Bit_score: 225
  • Evalue 4.00e-56
citB1; LuxR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 55.4
  • Coverage: 222.0
  • Bit_score: 225
  • Evalue 1.30e-56
DNA-binding response regulator, LuxR family {ECO:0000313|EMBL:ABR89974.1}; TaxID=375286 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium sp. (strain Marseille) (Minibacterium massiliensis).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 55.4
  • Coverage: 222.0
  • Bit_score: 225
  • Evalue 5.60e-56

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Janthinobacterium sp. Marseille → Janthinobacterium → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 648
ATGCCTTCCACGATTCTGCTGATCGACGACCACGCCATGTTCCGCGAGGGCCTGCGCCTCGCACTGCGAGAGGCGGAGCCCTCGATGACCATCGAAACCGCCAGCACCGGTGGCGAAGCGCTGCAGGCATTGCAGACCTTGCCGGTGCTCGATGCCGTCATGACCGACTACTACCTGCCCGACCTCGGCGGCGCCGCGCTGGTGCAGCAGTTGCACCGGCGCAGGGGCGGGCTTCGCGTGCTGGTGCTGTCGGCCTCCGAAGACCCGCATGACATCGAAACCGCGCTGGAAGCCGGGGCGCAGGGCTTCGTGCACAAGTCGGCCGACAGCCGGCAGTTGCTGGATGCGCTGCGGCGCGTGATGGGCGGCGAGCAGAACGTGGTGCACATGTCGCCGCAGGGCGTTTCACCGCTGCCTGTGCTGTCGACCCCGACCGACGGCCTGAGCCGCCTGACCGCGCGCCAGACCGAGGTACTGCACCTGCTGTGCGAGGGCCTGCGCAACGCGCAGATCGCGCAGCGGCTGGAGACTTCCGAGAAGACGGTGAAGGCCCATATCTCCGCGATCTTCGCGGCGCTCGACGTGTCCAACCGCACGCAGGCCACCATCGCGGCGCGCCGCGTGGGCCTGCTGGGCAAGCCGCGCTAG
PROTEIN sequence
Length: 216
MPSTILLIDDHAMFREGLRLALREAEPSMTIETASTGGEALQALQTLPVLDAVMTDYYLPDLGGAALVQQLHRRRGGLRVLVLSASEDPHDIETALEAGAQGFVHKSADSRQLLDALRRVMGGEQNVVHMSPQGVSPLPVLSTPTDGLSRLTARQTEVLHLLCEGLRNAQIAQRLETSEKTVKAHISAIFAALDVSNRTQATIAARRVGLLGKPR*