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SCNpilot_cont_1000_p_scaffold_329_3

Organism: SCNPILOT_EXPT_750_P_Variovorax_66_42

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(1740..2150)

Top 3 Functional Annotations

Value Algorithm Source
RNA recognition motif-containing protein n=1 Tax=Variovorax paradoxus B4 RepID=T1X588_VARPD similarity UNIREF
DB: UNIREF100
  • Identity: 94.9
  • Coverage: 137.0
  • Bit_score: 216
  • Evalue 2.00e-53
RNA recognition motif-containing protein similarity KEGG
DB: KEGG
  • Identity: 94.9
  • Coverage: 137.0
  • Bit_score: 216
  • Evalue 6.30e-54
RNA recognition motif-containing protein {ECO:0000313|EMBL:AGU47514.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.9
  • Coverage: 137.0
  • Bit_score: 216
  • Evalue 2.80e-53

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 411
ATGGGCAAGAAACTCTACGTAGGCAACCTCGCCTACTCCGTGCGTGACAACGACCTGGAACAGGCTTTCGGCGAGTTCGGCTCGATCGTCAGCGCCAAGGTCATGATGGAACGTGACACCGGCCGTTCGAAGGGCTTCGGCTTTGTCGAAATGGGTTCGGATGCCGAAGCACTCGCAGCCATTGAAGCCATGAACGGCCATTCGCTCCAGGGCCGCGCCCTGACGGTGAACGAAGCCCGTCCGATGGAAGCTCGTCCCCCCCGTAGCGGTGGTGGCGGCGGCGGCTACGGTGGTGGCGGCGGTGGCGGCTACGGCGGTGGTGGTGGCGGCGGTTACGGCGGCGGCGGCGGTGGCCGCAGCGGTGGTGGCGGCGGCTACGGCGGCGGCGGCGGTGGTCGCGGCGGCTACTAA
PROTEIN sequence
Length: 137
MGKKLYVGNLAYSVRDNDLEQAFGEFGSIVSAKVMMERDTGRSKGFGFVEMGSDAEALAAIEAMNGHSLQGRALTVNEARPMEARPPRSGGGGGGYGGGGGGGYGGGGGGGYGGGGGGRSGGGGGYGGGGGGRGGY*