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SCNpilot_cont_1000_p_scaffold_329_11

Organism: SCNPILOT_EXPT_750_P_Variovorax_66_42

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(8483..10435)

Top 3 Functional Annotations

Value Algorithm Source
carbamoyL-phosphate synthase l chain ATP-binding protein; K13777 geranyl-CoA carboxylase alpha subunit [EC:6.4.1.5] similarity KEGG
DB: KEGG
  • Identity: 86.3
  • Coverage: 648.0
  • Bit_score: 1096
  • Evalue 0.0
  • rbh
Acetyl/propionyl-CoA carboxylase, alpha subunit n=1 Tax=Variovorax sp. CF313 RepID=J2KHP9_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 86.3
  • Coverage: 650.0
  • Bit_score: 1096
  • Evalue 0.0
  • rbh
Variovorax paradoxus strain MEDvA23 contig_45, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ29252.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.5
  • Coverage: 647.0
  • Bit_score: 1111
  • Evalue 0.0

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1953
ATGAACACGAATTTCCGCAAGATCCTGATCGCGAACCGCGGCGAGATCGCCGTGCGCGTGATGCGCACCGCGCGCGCCATGGGCTGGCGCACCGTGGCCGTGTATTCCACCGCGGACGCGGACGCCGAGCATGTGCGGCAGGCCGACGAAGCCGTGTGGATCGGCGAATCGCTGCCCGCGCAGAGCTACCTGAACATCGCCGCGATCGTCGACGCAGCGCGCGCGAGCGGCGCCGACGCGGTGCACCCCGGCTACGGCTTTCTCGCGGAGAACGCGTCGTTCGCGCAGGCCTGCCGCGACGCGGGGCTGGTGTTCATCGGGCCTTCTCCGGAAGCCATCCTCGCGATGGGCGACAAGGCCGGCGCCAAGCGGCTGATGCAGGCGGCGGGCGTGCCGTGCATTCCCGGCTACCAGGGCGAAGACCAGGGCGCCGACAGGCTCGCGGCGGAGGCCGCGCGCATCGGCTGGCCCGTGATGATCAAGGCCACGGCGGGCGGCGGCGGGCGCGGCATGCGGCTGGTCGCGTCGGCCGTAGGCTTCGCCGAGGCGCTGCAGAGCGCGCAGTCCGAGGCGCTCAATGCCTTCGGCGACGCAACGGTGATCCTCGAGCGCGCCATCGTCGCGCCGCGCCACATCGAGATCCAGGTGTTCGCCGACCGGCACGGCAATGCCATCCACCTCGGCGAGCGCGACTGCTCGGTGCAGCGGCGGCATCAGAAGGTGATCGAGGAAGCGCCCTCGCCCGCCGTGTCCGCGGCGCTGCGCGAACGCATGGGTGCGACCGCCGTCGCCGCCGCGAAAGCCATCGCCTACGAGGGCGCGGGCACGCTCGAATTCCTGCTCGACGCCGAAGGCCAGTACTGGTTCATGGAAATGAACACGCGCCTGCAGGTGGAGCACCCGGTGACCGAGGCGGTGACGGGCCTGGACCTGGTCGAGCTGCAACTGCGCGTGGCGGCCGGCGAGCCCCTGCCGCTCTCGCAGCAGGACGTGCGCATCGACGGCCACGCCATCGAAGTGCGGCTGTGCGCTGAAGATCCGCTGCAGGGCTTCATGCCGCAGAGCGGCACGCTCGCCGCCTGGCGGCCTTCGCCGGCATTGCGCACCGAGCATGCGCTGCGCGACGGCGCGGCGGTGCCGCCGTTCTACGACTCGATGATCGCCAAGCTCGTGGCGAGCGGCCGCACGCGCGACGAAGCCCGCCGCAAGCTGCTCGCCGGCCTGGGCGACACCGTAGCGCTGGGCGTCGCGACCAATCAGCAACTGCTGCAACGCGCGCTTTCGCACGAGGTGTTCGCCGGCGGCGGCGCGACCACCGCCTTCATTGCCGATCACCTCGATGCGCTGCTCGCGCCCGACGCGGCCACCGACACGCAAGCCGCGCTGCTGGCCGCACTGCTGCTGCAACTGGGCGAGCGCGGCTGGCCATCGCCGCTCGCGCACACGCTGCCGAACGCGCTGCGCTTTGCGCTGGGCGGCGCGGTGCACGAGGCCCGCGTGACGCCGCGCGGCGCGGGCCGCTTCGACGTCGCGCTCGATGGCGCGCCGCCGGAGCCTGTCGCCCTGCTCGCGCTGCCCGGCGACGGCACGGTGCGTTTCTCGTGCGACGGGCTTTCCGAGCAGGCTTTCGTCGTGCGGGATGCGGGCCGCTCGAGTTTTCATTTCCGCGGCCAGGCCTTCCAGCTCGACGACCTCACCCATGCCGCGGTCGCGCGCGCCGGCGCGGACGGCGGCGACGGCCTGCTGCGCGCTTCGATGAACGGCCGCGTCATCGCGCTGCTCGCGGCCGAGGGCGACACCGTCGCCGCCGGGCAGCCGCTGGTCACGCTGGAGGCCATGAAGATGGAGCATGTGCATTGCGCCCCGCGCGCCGGCCGCGTCGCCGCGCTGCATGTGGCGGTGGGCGCGCAGGTCGCGGCGCGCCATGTGGTCGCGGAGATCGCCGACGCCTGA
PROTEIN sequence
Length: 651
MNTNFRKILIANRGEIAVRVMRTARAMGWRTVAVYSTADADAEHVRQADEAVWIGESLPAQSYLNIAAIVDAARASGADAVHPGYGFLAENASFAQACRDAGLVFIGPSPEAILAMGDKAGAKRLMQAAGVPCIPGYQGEDQGADRLAAEAARIGWPVMIKATAGGGGRGMRLVASAVGFAEALQSAQSEALNAFGDATVILERAIVAPRHIEIQVFADRHGNAIHLGERDCSVQRRHQKVIEEAPSPAVSAALRERMGATAVAAAKAIAYEGAGTLEFLLDAEGQYWFMEMNTRLQVEHPVTEAVTGLDLVELQLRVAAGEPLPLSQQDVRIDGHAIEVRLCAEDPLQGFMPQSGTLAAWRPSPALRTEHALRDGAAVPPFYDSMIAKLVASGRTRDEARRKLLAGLGDTVALGVATNQQLLQRALSHEVFAGGGATTAFIADHLDALLAPDAATDTQAALLAALLLQLGERGWPSPLAHTLPNALRFALGGAVHEARVTPRGAGRFDVALDGAPPEPVALLALPGDGTVRFSCDGLSEQAFVVRDAGRSSFHFRGQAFQLDDLTHAAVARAGADGGDGLLRASMNGRVIALLAAEGDTVAAGQPLVTLEAMKMEHVHCAPRAGRVAALHVAVGAQVAARHVVAEIADA*