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SCNpilot_cont_1000_p_scaffold_329_13

Organism: SCNPILOT_EXPT_750_P_Variovorax_66_42

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(12139..12915)

Top 3 Functional Annotations

Value Algorithm Source
histidine kinase n=1 Tax=Variovorax paradoxus RepID=UPI00036016D6 similarity UNIREF
DB: UNIREF100
  • Identity: 89.1
  • Coverage: 256.0
  • Bit_score: 450
  • Evalue 1.60e-123
  • rbh
MHYT domain-containing protein {ECO:0000313|EMBL:EJL72631.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.6
  • Coverage: 258.0
  • Bit_score: 441
  • Evalue 6.00e-121
putative signaling protein similarity KEGG
DB: KEGG
  • Identity: 85.3
  • Coverage: 258.0
  • Bit_score: 431
  • Evalue 1.80e-118
  • rbh

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 777
ATGACTCCGCTTGTCGTAGGCCAATTGCTCACGCCCGAATACACCCCGGGCATGGTGGCCCTCTCCTTCCTCATCTCCTTCGCCGGCTCGCTGGTGGCCTTGATCTGCGCGCGGCGCATGATCGGGGCCGACGGCAAGCCCAATCTCGCCGTCGTGACCTGCGCCGCGGTGGCGCTGGGCGGCATCGGCATCTGGTCGATGCACTTCATCGGCATGCTGGCGTACCGGCTGCCGGTGCCCATTTCGTACAACATGCCGCTCACCGTGGTGTCGCTGGTGGCCGCCATCCTCATTTCGGGCATCGCGCTCTACATGGCCGGGGGACGGCGCCACTTCAGCCGCTCGGGCTGGCTGGCCGGCAGCCTGCTGGCCGGGCTCGGCGTGTGCGTGATGCACTACATGGGCATGTACGCCATGAACATGCGCGCATCGATTTCCTTCGACATCGCCACGGTCGGGCTGTCGGCGCTGATCGCCGTCACCGCCGCCGCGGCAGCCCTGTGGCTGGCCTTCAACCTGCGCAAGTTCACGCACCAGGTCGCGGCCGCCGCGGTGATGGGCGTGGCGGTATGCACCATGCACTACGTGGGCATGAGCGCGGCCAGCATGATCTGCACCGCGAGCGCCCCCGCCGACGCGCTGGCCATCGGCGGCAGCTACATGGGCCTGACGGTGTTCGGCACGGCCGGCGCGGTGCTGATCTTCATCTACTGGGTGGTCACCGGCAGCAGCCTGGACACGCCGCTCGCCGCCGCGCGGCGTCCGCGCCCGAGCTGA
PROTEIN sequence
Length: 259
MTPLVVGQLLTPEYTPGMVALSFLISFAGSLVALICARRMIGADGKPNLAVVTCAAVALGGIGIWSMHFIGMLAYRLPVPISYNMPLTVVSLVAAILISGIALYMAGGRRHFSRSGWLAGSLLAGLGVCVMHYMGMYAMNMRASISFDIATVGLSALIAVTAAAAALWLAFNLRKFTHQVAAAAVMGVAVCTMHYVGMSAASMICTASAPADALAIGGSYMGLTVFGTAGAVLIFIYWVVTGSSLDTPLAAARRPRPS*