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SCNpilot_cont_1000_p_scaffold_329_14

Organism: SCNPILOT_EXPT_750_P_Variovorax_66_42

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(13050..14765)

Top 3 Functional Annotations

Value Algorithm Source
SMP-30/Gluconolaconase/LRE-like region-containing protein n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V2C4_VARPE similarity UNIREF
DB: UNIREF100
  • Identity: 85.8
  • Coverage: 572.0
  • Bit_score: 980
  • Evalue 5.60e-283
  • rbh
Variovorax paradoxus strain MEDvA23 contig_45, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ29255.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.7
  • Coverage: 573.0
  • Bit_score: 995
  • Evalue 3.10e-287
smp-30/gluconolaconase/lre-like region-containing protein similarity KEGG
DB: KEGG
  • Identity: 85.8
  • Coverage: 572.0
  • Bit_score: 980
  • Evalue 1.80e-283
  • rbh

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1716
ATGCCCCGCAGATACCTTCGCGCCGCCGTGCTGGCCGCACCCCTCGCCCTGCTGGCCGCCTGCGGCACGGTGATGCCGCCGGCCTCGGCACCACCCTCGTCGGCGCCGACCTCGGTCGCATCGCCAGCGCCGCTCCCGCCGGCGACACCGCCCACGCGGCCCGCGGCGTGGGCCGCGCCAGAGGCGCTGGTCGCGCCCTCTTCGTTCGCGGGCGTGCACGGCCTGGCGATCGACGCCAAGGGCAGGCTGCTCGCGGGCTCGGTGCTGGGCAACACGCTGTGGGAGGTCGACCGCGCCACCGGCGCCGCCAAGGTGCTGATCGACGCGCCCGAGGGCCAGGCCGACGACATCGCCGTGGGCCCGAACGGCGAGTTGGCCTGGACCAACTACCTCATGGGCAAGCTGCGCTACCGCGAGCACGACGGCGCCCCGCTGCGCGTGCTCGCCAAGGACCTGCCCGGCCTCAATTCGCTCGACTTCGACCGCCGCAACGGCAAGCTCTACGCCTCGCAGGTGTTCCTGGGCGACGCGCTGTGGGAGATCGACCGCGCGGGCCAGAAGCCGCCCCGCCTCATCAAGAAGGACATGGGCGGCTTCAACGGCTTCGAGGTCGGCCCCGACGGCATGCTCTACGGGCCGCTGTGGTTCAAGGGCCAGGTCGTGAAGATCGATCCCGCCGACGGCCGCATGGCGGTGATCGCCGACGGCTTCCAGGTGCCGGCCGCCGCCAATCTCGACGGCAAGGGCAACCTCTGGGTGGTCGACGCGCGCAGCGGCGAGCTGGTGCGGGTGGAACTGGCCAGCGGGCGCAAGACGGTGGCCAAACAGCTGCGGCCTTCGCTCGACAACCTGGCCATCGCATCGGACGGCACGATCTACGTGTCGAACATGGCCAACAACGAGATCCAGGCCTTCGACCCCGCCACCGGCAGCCTGCGCACGCTCACCAGCGGCAAGGTGGCGGTGCCGGCGGGCATGAAGATCGAGGGCAGCGACCTCTGGGTGGCCGACGTCTTCGGCTTCCGCCGGGTCGACGTGCGAACGGGCGAGGTGCACGACGTGTTCCGCATGCAGCGCGACCCCGAGCTCGACTACCCCTTCGCGGTCGGCCTGTCGCCCAAGCTGTTCGCGCTCAGCTCGTGGTTCACGGGCTCGGTGCAACTGGTCAACCGCCAGACGCTCAAGACCGTGGAAGTGATCCACGGCCTGAAGGCGCCCTTCGACGCCATTCCCATGCCGGACGGCAGCGTGATCTACGCCGAGATCGCCACCGGCAGCATCACCCGCGCCAGCGGGCCTAAGTTTGCCGAAAAGTCAGTGCTCGCCAGCGGCCTGAGCGGCCCGGTGCAGATGGTGCTGGGCCAGGACGGCGCGCTCTACGTGACCGAGGCGGCCGGCAAGCTGGTGCGCATTCCGCTGGACGCCAGCGCGCCGTTGCGCACCGTGGCCGACGGGCTGGCGCTGCCGGAGGGCCTGGCGCAGACGCCGTGGGGCAGCTTCATCGTGGCCGAGAGCGCGGCGCGCCGGCTGGTGGAGATCGACCCGGCCAACGGCAGCCGCCGCACCGTCGCCGAAAACCTGCCGATCGGCCTGGCGCCCGGGCCCGGACTGCCGCCGCCCTACGTGGTGACGGGGGTCGCGGTGGGTGCCGATGGCACCGTCTACATGGCGGCCGATCGCAACAACGCGATATATCGAATTCGCGCTGCAAGGTAG
PROTEIN sequence
Length: 572
MPRRYLRAAVLAAPLALLAACGTVMPPASAPPSSAPTSVASPAPLPPATPPTRPAAWAAPEALVAPSSFAGVHGLAIDAKGRLLAGSVLGNTLWEVDRATGAAKVLIDAPEGQADDIAVGPNGELAWTNYLMGKLRYREHDGAPLRVLAKDLPGLNSLDFDRRNGKLYASQVFLGDALWEIDRAGQKPPRLIKKDMGGFNGFEVGPDGMLYGPLWFKGQVVKIDPADGRMAVIADGFQVPAAANLDGKGNLWVVDARSGELVRVELASGRKTVAKQLRPSLDNLAIASDGTIYVSNMANNEIQAFDPATGSLRTLTSGKVAVPAGMKIEGSDLWVADVFGFRRVDVRTGEVHDVFRMQRDPELDYPFAVGLSPKLFALSSWFTGSVQLVNRQTLKTVEVIHGLKAPFDAIPMPDGSVIYAEIATGSITRASGPKFAEKSVLASGLSGPVQMVLGQDGALYVTEAAGKLVRIPLDASAPLRTVADGLALPEGLAQTPWGSFIVAESAARRLVEIDPANGSRRTVAENLPIGLAPGPGLPPPYVVTGVAVGADGTVYMAADRNNAIYRIRAAR*