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SCNpilot_cont_1000_p_scaffold_329_26

Organism: SCNPILOT_EXPT_750_P_Variovorax_66_42

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 28023..28274

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI00037393EB similarity UNIREF
DB: UNIREF100
  • Identity: 88.0
  • Coverage: 83.0
  • Bit_score: 151
  • Evalue 4.90e-34
Uncharacterized protein {ECO:0000313|EMBL:EJM24661.1}; TaxID=1144325 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. GM21.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 42.5
  • Coverage: 80.0
  • Bit_score: 63
  • Evalue 1.40e-07

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Taxonomy

Pseudomonas sp. GM21 → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 252
GTGACAAGCGTGGTGTTGACCTACACAGGCAGTCCCGGCAAGAAATTGCTGGCGGAAGCGCGGCTGCGCCGCTGCGTGCCGGGTGTGGTGCTGACACCGAAGACCAGCACGCTGCTAGAAGCCCAGCTCGACGATGAGCAGCTCGCGGCACTCGCAAAGAACCCTGAGTGGGCCGTCTCCCAGCCCACCTTCGCGGAAATCCGCAAGCCTGTCTTCAACCTGAAAAACGCTCGCGCCAAGCTCGCGAAGTAG
PROTEIN sequence
Length: 84
VTSVVLTYTGSPGKKLLAEARLRRCVPGVVLTPKTSTLLEAQLDDEQLAALAKNPEWAVSQPTFAEIRKPVFNLKNARAKLAK*