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SCNpilot_cont_1000_p_scaffold_461_8

Organism: SCNPILOT_EXPT_750_P_Variovorax_66_42

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(6520..7206)

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter; K02010 iron(III) transport system ATP-binding protein [EC:3.6.3.30] similarity KEGG
DB: KEGG
  • Identity: 88.1
  • Coverage: 227.0
  • Bit_score: 400
  • Evalue 3.00e-109
  • rbh
ABC transporter n=1 Tax=Variovorax paradoxus RepID=UPI00035D6CF0 similarity UNIREF
DB: UNIREF100
  • Identity: 88.6
  • Coverage: 228.0
  • Bit_score: 401
  • Evalue 4.30e-109
  • rbh
ABC transporter related protein {ECO:0000313|EMBL:ADU38446.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.1
  • Coverage: 227.0
  • Bit_score: 400
  • Evalue 1.40e-108

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 687
ATGAGTTCTTCGCTGCACCTCGAATCGGTACGGCTCGCCTACGACACGCCGCGCGGACCGCACACCGTGGTCGACGACTTTTCGCTCGCGCTGGCCGCGGGCGACATCGCCTGCCTGTTCGGCCCCTCGGGCTGCGGCAAGACCACGGTGCTGCGCGCCATCGCCGGCTTCGAGCCGGTGCGTGCCGGCAGCATCCGCCTGGGCGATGCATTGCTGTCGTCCAGCCAGATCCACCTGCCGCCCGAGCAGCGGCGCGTAGGCATGATGTTCCAGGAATACGCGCTGTTCCCGCACCTGTCGGCCGCCAGGAACGTGGCCTTCGGGCTGCGCCGCCTGCCTCGCGCCGCGCAGCGCGAGCGCGTGGCCGAGATGCTCGCGCTGGTCGGCCTGGCCGATGCCGCGGAGCGCTATCCGCACGAGCTTTCGGGCGGGCAGCAGCAACGCATCGCGCTGGCCCGCGCGCTCGCGCCCTCGCCCGCGCTGCTGCTGCTCGACGAGCCTTTCTCCAACCTCGACGGCGGCACGCGCGAGCGCCTGACGGCGCAGGTGCGAGACATCCTCAAGCAGGCGGGCCAGACCGCGATCCTGGTGACGCACAACGAGGCCGAGGCACAGGCCATGGCCGACCGCATCGGCGTGATGCACGGCGGGCGCGTCACGCACTGGCAAGGCACCGCGGTGGCATAG
PROTEIN sequence
Length: 229
MSSSLHLESVRLAYDTPRGPHTVVDDFSLALAAGDIACLFGPSGCGKTTVLRAIAGFEPVRAGSIRLGDALLSSSQIHLPPEQRRVGMMFQEYALFPHLSAARNVAFGLRRLPRAAQRERVAEMLALVGLADAAERYPHELSGGQQQRIALARALAPSPALLLLDEPFSNLDGGTRERLTAQVRDILKQAGQTAILVTHNEAEAQAMADRIGVMHGGRVTHWQGTAVA*