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SCNpilot_cont_1000_p_scaffold_461_9

Organism: SCNPILOT_EXPT_750_P_Variovorax_66_42

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(7203..8879)

Top 3 Functional Annotations

Value Algorithm Source
iron ABC transporter permease n=1 Tax=Variovorax paradoxus RepID=UPI00037287F5 similarity UNIREF
DB: UNIREF100
  • Identity: 92.8
  • Coverage: 556.0
  • Bit_score: 1022
  • Evalue 1.30e-295
  • rbh
binding-protein-dependent transport systems inner membrane component; K02011 iron(III) transport system permease protein similarity KEGG
DB: KEGG
  • Identity: 92.9
  • Coverage: 550.0
  • Bit_score: 1007
  • Evalue 1.30e-291
  • rbh
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ADU38445.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.9
  • Coverage: 550.0
  • Bit_score: 1007
  • Evalue 5.90e-291

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1677
ATGAACATCGGCGGTCGGTATGGGGGCCTGCAAGCCGCGGGCCCGGCCTGGCGCTGCGCGTCTTTCCTGATCGCCCTTGGCGTGCTCGCGCCGGTGCTCACGCTGGCCTGGCTCGCGTTCGGCTCGGGCGTGGGGCATTGGGGGCCGCTGTTCGCGCACGTGCTGCCGCAGGCGGCGCTCAACACGGCCTTGCTGCTGGCCGGCGTCGGCACGCTGGTGCTGCTGATCGGCACCGGCTGCGCCTGGCTGGTGACGGCGCACGACTTCCCCGGGCGCGGCGTGCTGCACTGGGCGCTGCTGCTGCCGCTGGCGATGCCGACCTACATCGTCGCTTTCGCCTATCTCGACCTGCTGCACCCCATCGGCCCGGTGCAGGGCGCCATCCGCTGGATGCTGGGCTTCGACAGCCCGCGCCAGTTCCGCCTGCCCGACCTGCGCTCGATGCCCGGCGCGATCTTCGTGCTGGGCTTCGTGCTGTACCCCTACGTCTACATGACGGCGCGCGCCATGTTCATGACGCAGCCGGCCCACCTGATGGAAGCCGCGCGCATGCTCGGCGAGAGCCGGCGCGGCGCGTTCTTCCGCGTGGCGCTGCCGCTCGCGCGGCCGGCGCTGGCCGTGGGCCTGAGCCTGGCGCTGCTGGAAACGCTCAACGACATCGGCGCCTCCGAATTCCTGGGCGTCAACACGCTCACCGTGGCGGTCTACACCACCTGGATCACGCGCTCCGACCTCGCGGGCGCCGCGCAGATCGCATGCGCCATGCTGTTCATGGTGGTGGCGCTGGTCTGGCTCGAACGCAGCGGCCGCAGGCACCAGCGCTTCGGCTCGGCGCAGCGCATGCGCGCGGTGCAGCCGCGCCGGCTGCGCGGCGGGGCCGCATGGGCCGCGACCGCCGCCGCCGCGCTGCCGGTGCTGATCGGCTTCGTCGCCCCGGCGCTCTACCTCGTCTGGGAGAGCGCCAAGCGGCTGCGCCAGGGCGGCGGCATTTCACAGGGCCTGCTCGCGAGCCTGGGCAACACGCTGGCGTTGGCCGCGGGCGTGACCGTGGCGGCCGTGGCCGCGGGCCTGGTGGTCGCCTGGGCCGCGCGCACGCAAGGCTCCGGCATCAACCGCGCGCGCTGGCAGGCGCGCGTCGCCACCCTGGGCTATGCGGTGCCTGGCACGGTGCTCGCCATCGGCCTGCTGACGCCCGCGCTGGCCTTCGACGCCGCGCTGGCCACGGCCTTCGGCTGGCAGGGCCTGCCGCTGATGGCCGCCGGCGTGGTGCTGGTGGTGGCCTGCACGATCCGCTTCCTGGCAATGCCGGTGGGCGGCATCGAGGCGGGTCTTTCGCGCATTCCGCCGGCCATCGAGCAGGCCTCGCGGCTGCTCGGCGAAACCACCGGCGGCACGCTGCGCCGCGTGCACCTGCCGCTGCTGCGCCCCGCGCTCGCGGCCGGCGCACTGCTGGTGTTCGTCGACGCGATGAAAGAGTTACCCGCCACGCTGCTGCTGCGGCCGGCCAATTTCGACACCCTCGCCACCTGGCTCTACGCCGAGGCCGCGCGCGGCACCTACGAGGAAGGCGCGATCGCCGCGCTCGCCATCGTGCTGGCCGGCCTGCTGCCGGTGGTGCTGCTGGCACGCAACCAGCTGGGCACGCCCGCCGCCACTTTCAGTCCGGACACGCCATGA
PROTEIN sequence
Length: 559
MNIGGRYGGLQAAGPAWRCASFLIALGVLAPVLTLAWLAFGSGVGHWGPLFAHVLPQAALNTALLLAGVGTLVLLIGTGCAWLVTAHDFPGRGVLHWALLLPLAMPTYIVAFAYLDLLHPIGPVQGAIRWMLGFDSPRQFRLPDLRSMPGAIFVLGFVLYPYVYMTARAMFMTQPAHLMEAARMLGESRRGAFFRVALPLARPALAVGLSLALLETLNDIGASEFLGVNTLTVAVYTTWITRSDLAGAAQIACAMLFMVVALVWLERSGRRHQRFGSAQRMRAVQPRRLRGGAAWAATAAAALPVLIGFVAPALYLVWESAKRLRQGGGISQGLLASLGNTLALAAGVTVAAVAAGLVVAWAARTQGSGINRARWQARVATLGYAVPGTVLAIGLLTPALAFDAALATAFGWQGLPLMAAGVVLVVACTIRFLAMPVGGIEAGLSRIPPAIEQASRLLGETTGGTLRRVHLPLLRPALAAGALLVFVDAMKELPATLLLRPANFDTLATWLYAEAARGTYEEGAIAALAIVLAGLLPVVLLARNQLGTPAATFSPDTP*