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SCNpilot_cont_1000_p_scaffold_461_10

Organism: SCNPILOT_EXPT_750_P_Variovorax_66_42

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(9025..10086)

Top 3 Functional Annotations

Value Algorithm Source
iron ABC transporter substrate-binding protein n=1 Tax=Variovorax paradoxus RepID=UPI00035C7101 similarity UNIREF
DB: UNIREF100
  • Identity: 95.5
  • Coverage: 354.0
  • Bit_score: 654
  • Evalue 4.40e-185
  • rbh
putative ABC transporter, iron-binding protein similarity KEGG
DB: KEGG
  • Identity: 90.9
  • Coverage: 353.0
  • Bit_score: 636
  • Evalue 6.60e-180
  • rbh
Putative ABC transporter, iron-binding protein {ECO:0000313|EMBL:AGU50906.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.9
  • Coverage: 353.0
  • Bit_score: 636
  • Evalue 3.00e-179

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1062
ATGACCGAACGCTCAAGCGTCCAAGGCCGCGCCGCGCGCGCACTGCTCGGCGCCAGCGCCACCTTGCTGGCCGTCGCCGCCCTGCCCGCGCAGGCCGCCACCGACGAGCTCACGCTCTACACGACGCGCGAGCCGGCGCTGATCCAGCCGCTCATCTCCGCATTCAGCGCGCAGAGCAACATCAAGGTCAACACCGTGTTCGTGAAGGACGGCCTGCTGGAACGCGTGAAGGCCGAAGGCGCGCGCTCGCCGGCCGACGTGCTGATGACGGTGGACATCGGCAACCTCATGGACCTGGTCGACGGCGGCGTGACACAGCCGGTGAAGTCGGCGGTGCTCGAGTCGGCCATTCCCGCCAACCTGCGCGGCGCCGACGGCCAGTGGTTCTCGCTCTCGATGCGCGCACGCGTGCTGTACGCCGACAAGAGCCTGCCGCTCACCAGCTTCCGCTACGAAGACCTGGCCAACCCCAAGTACAAGGGCAAGGTCTGCATCCGCGCCGGACAGCACCCCTACAACACCGCGCTGGTCGCCTCGCTGATCGCGCACGACGGCGAAGCCAAGGCCGAGCAGTGGCTGCGCGGCGTCAAGGCCAACCTGGCGCGCAAGGCCACCGGCGGCGACCGCGACGTGGCGCGCGACATCCTGGGCGGCATCTGCGACATCGGCCTGGCCAACTCGTACTACGTCGGCCAGATGAAGAGCGCCAAGGAAGGCACCGACGCGCGCAAGTGGGGCGACGCCATCAAGGTGGTGCGCCCGACCTTCGCCAACGCCAAGAGCGGCGGCACGCACGTCAACATCAGCGGCGCGTCGGTGGCCAAGAACGCGCCGCAGCGCGCCAACGCGGTCAAGCTGCTCGAGTTCCTGGTGTCGGAGCCGGCACAGGCGCTCTACGCGCAGGCCAACTACGAATACCCGGTGCGCAAGGGCGTGGCGCTCGATCCGATCATCGGCCAGACCATCGGCGAGCTGAAGGTCGATCCGCTGCCGCTGACCGAGATCGCCAAGTACCGCAAGCAGGCCAGCGCCCTTGTCGACAAGGTCGGCTTCGACCAATAG
PROTEIN sequence
Length: 354
MTERSSVQGRAARALLGASATLLAVAALPAQAATDELTLYTTREPALIQPLISAFSAQSNIKVNTVFVKDGLLERVKAEGARSPADVLMTVDIGNLMDLVDGGVTQPVKSAVLESAIPANLRGADGQWFSLSMRARVLYADKSLPLTSFRYEDLANPKYKGKVCIRAGQHPYNTALVASLIAHDGEAKAEQWLRGVKANLARKATGGDRDVARDILGGICDIGLANSYYVGQMKSAKEGTDARKWGDAIKVVRPTFANAKSGGTHVNISGASVAKNAPQRANAVKLLEFLVSEPAQALYAQANYEYPVRKGVALDPIIGQTIGELKVDPLPLTEIAKYRKQASALVDKVGFDQ*