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SCNpilot_cont_1000_p_scaffold_461_11

Organism: SCNPILOT_EXPT_750_P_Variovorax_66_42

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(10243..10791)

Top 3 Functional Annotations

Value Algorithm Source
aromatic compound catabolic protein n=1 Tax=Variovorax paradoxus RepID=UPI00035EFEE2 similarity UNIREF
DB: UNIREF100
  • Identity: 92.3
  • Coverage: 182.0
  • Bit_score: 349
  • Evalue 2.70e-93
  • rbh
Uncharacterized protein {ECO:0000313|EMBL:EJL79217.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 91.2
  • Coverage: 181.0
  • Bit_score: 343
  • Evalue 2.00e-91
thioesterase superfamily protein similarity KEGG
DB: KEGG
  • Identity: 87.4
  • Coverage: 182.0
  • Bit_score: 331
  • Evalue 1.80e-88
  • rbh

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 549
ATGACACAGAACCCCAGCCAGCTCGAATCCTGGATCGCCGAAGAACGCCGCATTGCCGAGCGCCTCGAGGCCGGCCCGGGCCCCGGCCTCGCGCGCCCCGAACAGATCGCGGGCAAGACCGGCCTCGAAGTGATGCAGGCCATGCTGGCCGGCGAGATTCCCTACGCGGCCATCGCCAAGACGCTGGATTTCACGATCATGGAAGTGCGCGCCGGCGTGGCCATCTTCCAGGGCACGCCACTGCCGCAGCACCTGAACCCGCTGGGCACCATCCACGGCGGCTGGGTCGCGACGATGCTCGACTCCGCCCTGGGCTGCTCGGTGCACACCATGATGCCGCCCGGCCGCGCCTACACCACCGCCGAGCTTGGCGTGAACTACGTCAAGGGCCTCACGCCCAAGGTGCAGCGCGTGCGCGCCGAGGGCAAGGTGATCCATTGCGGCAAGCAGCTGGCCACCGCCGAAGCGCGCCTCTACGGACCCGACGGCACGCTGTACGCGCACGCCACGACCACCTGCCTGGTGTTCGAGATCCCGCCGGCGCGCTGA
PROTEIN sequence
Length: 183
MTQNPSQLESWIAEERRIAERLEAGPGPGLARPEQIAGKTGLEVMQAMLAGEIPYAAIAKTLDFTIMEVRAGVAIFQGTPLPQHLNPLGTIHGGWVATMLDSALGCSVHTMMPPGRAYTTAELGVNYVKGLTPKVQRVRAEGKVIHCGKQLATAEARLYGPDGTLYAHATTTCLVFEIPPAR*