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SCNpilot_cont_1000_p_scaffold_461_16

Organism: SCNPILOT_EXPT_750_P_Variovorax_66_42

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(14957..15271)

Top 3 Functional Annotations

Value Algorithm Source
signal peptide protein n=1 Tax=Variovorax paradoxus RepID=UPI0003680A3C similarity UNIREF
DB: UNIREF100
  • Identity: 78.3
  • Coverage: 106.0
  • Bit_score: 172
  • Evalue 2.60e-40
signal peptide protein similarity KEGG
DB: KEGG
  • Identity: 78.5
  • Coverage: 107.0
  • Bit_score: 169
  • Evalue 5.20e-40
Putative signal peptide protein {ECO:0000313|EMBL:ACS20309.1}; Flags: Precursor;; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.5
  • Coverage: 107.0
  • Bit_score: 169
  • Evalue 2.30e-39

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 315
ATGAAAAAGCTTACTTTGGCATTCGGCGCCGCGGCCTTGTTGTCGCTGGCCGCATTCACCGCACCGGCGCAGGCACAGCCCGGCGGCAGCTTCATTCAGGCACAGGTGTACGTCGTGCCGCCACCGCCGCCGCGCCGTCATTACTACGCGCCGCCTCCGCCGCGCTACTACCACGGCCCGCGCCACTACCACGGCGGCGACCGCTACTACCGCGACCGCCGCTGGGATGACCGCCGCCATGGTCGCCGTGACAACGACGGTGACGGCGTGCCCAACCGCTACGACCGCCGGCCGAACAACCCCTATCGCTACTGA
PROTEIN sequence
Length: 105
MKKLTLAFGAAALLSLAAFTAPAQAQPGGSFIQAQVYVVPPPPPRRHYYAPPPPRYYHGPRHYHGGDRYYRDRRWDDRRHGRRDNDGDGVPNRYDRRPNNPYRY*