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SCNpilot_cont_1000_p_scaffold_461_25

Organism: SCNPILOT_EXPT_750_P_Variovorax_66_42

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 23671..24741

Top 3 Functional Annotations

Value Algorithm Source
sugar ABC transporter ATP-binding protein n=1 Tax=Variovorax paradoxus RepID=UPI0003711EE3 similarity UNIREF
DB: UNIREF100
  • Identity: 93.0
  • Coverage: 356.0
  • Bit_score: 661
  • Evalue 4.70e-187
  • rbh
ATPase component of ABC-type sugar transporter {ECO:0000313|EMBL:EJL79230.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.3
  • Coverage: 356.0
  • Bit_score: 661
  • Evalue 8.70e-187
ABC transporter; K02023 multiple sugar transport system ATP-binding protein similarity KEGG
DB: KEGG
  • Identity: 92.1
  • Coverage: 356.0
  • Bit_score: 649
  • Evalue 7.60e-184
  • rbh

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1071
ATGGCATCCGTTTCCTTTCGCAATATCCAGAAATCCTTCGGCAAGGTCCAGATCATCAAGGGCCTGGGCTTCGACATCACCGACGGCGAGTTCGTGGTGCTGGTCGGGCCCTCGGGCTGCGGCAAGTCGACCCTGCTGCGCATGCTCGCGGGGCTGGAGGACATCAGCGGCGGCGAGATCATGATCGACGGCCGCGTGGTCAACGACCTCGAGTCGAAGGACCGCGACATCGCGATGGTGTTCCAGAGCTACGCGCTGTATCCGCACATGACGGTGGGCGAGAACATGGGCTTCAGCCTGCGCCTGCGCAGCGCCGAGAAATCGGTAACCGACGAGCGCGTGGCGCGCGCCGCGAAGATCCTCAACCTCGACAGCCTGCTGGGCCGCTATCCGCGCGAGCTGTCGGGCGGCCAGCGCCAGCGCGTGGCCATGGGCCGGGCCATCGTGCGCGACCCGAAGGTGTTCCTGTTCGACGAGCCGCTGTCCAACCTCGACGCCAAGCTGCGCGTGGCCATGCGCGCCGAGATCAAGGCGCTGCACCAGCGGCTGAAGACCACCACCGTCTACGTGACACACGACCAGATCGAGGCCATGACCATGGCCGACCGCATCGTGGTGATGCACGACGGCATCGTCGAGCAGATCGGCACGCCGCTCGATCTGTACGACCGGCCCGACAACCTGTTCGTGGCGCAGTTCATCGGCTCGCCGTCGATGAACGTGATCGAGGGCACGGTGCGCCGCGCGGGCGGCGATTGCTGGGTCGAGGCGCAGGGCGCGCGCTGGCCGGTGCCGGCCGCCACCTCGGCGCCCGACGGCCAGCCGGTGCACTACGGCGTGCGGCCCGGCGACATCACGCTCGGCGGCGCAGCGCAGTCGGTGGCGGCCAAGGTGATCGTGGTCGAGCCCACGGGCGCGGAAACCGAACTGCTGGTGCAGGTCGGCGAAGCCCGGCTGGTGCTGGCGGTGCATGGCCGCGTCGATGCCCGGCCCGACGAGATCGTCAACCTGGCGATCGACACGCCGCGCGTGCACCTGTTCGACCGGCAGACCGGCCGGCGCATGGGCTGA
PROTEIN sequence
Length: 357
MASVSFRNIQKSFGKVQIIKGLGFDITDGEFVVLVGPSGCGKSTLLRMLAGLEDISGGEIMIDGRVVNDLESKDRDIAMVFQSYALYPHMTVGENMGFSLRLRSAEKSVTDERVARAAKILNLDSLLGRYPRELSGGQRQRVAMGRAIVRDPKVFLFDEPLSNLDAKLRVAMRAEIKALHQRLKTTTVYVTHDQIEAMTMADRIVVMHDGIVEQIGTPLDLYDRPDNLFVAQFIGSPSMNVIEGTVRRAGGDCWVEAQGARWPVPAATSAPDGQPVHYGVRPGDITLGGAAQSVAAKVIVVEPTGAETELLVQVGEARLVLAVHGRVDARPDEIVNLAIDTPRVHLFDRQTGRRMG*