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SCNpilot_cont_1000_p_scaffold_461_26

Organism: SCNPILOT_EXPT_750_P_Variovorax_66_42

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(24755..25852)

Top 3 Functional Annotations

Value Algorithm Source
endonuclease n=1 Tax=Variovorax paradoxus RepID=UPI000365BBD0 similarity UNIREF
DB: UNIREF100
  • Identity: 93.6
  • Coverage: 346.0
  • Bit_score: 660
  • Evalue 1.10e-186
  • rbh
Variovorax paradoxus strain MEDvA23 contig_58, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ26848.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.9
  • Coverage: 346.0
  • Bit_score: 665
  • Evalue 6.10e-188
endonuclease/exonuclease/phosphatase similarity KEGG
DB: KEGG
  • Identity: 93.4
  • Coverage: 346.0
  • Bit_score: 659
  • Evalue 7.60e-187
  • rbh

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1098
GTGCCCTTTTTCGTTGCCGGCATGGCGCTGCCCGGCTCGGGCCACAATTGTTGCGCCATGCAATACATCCCGCCCAACTACGCCACGCTCTTCGTCGCCACCTGCAACCTCCTGAACCTCGCGAACCCGAACCGCGCGTACTACGAGAACCAGGACGCCTACACCGAGCGCGAGTACGAACGCAAGATCGACTGGACCGGCGAGCGCTTCCATGCACTCAATGCCGACGTGCTGGCGGTGCAGGAAGTGTGGGACGAAGCGGCGCTGAAAGCCGCCATCGCGCGCAGCGGCCTGCGCTACGACTTCGTCTCGGCGCCCGGAGCCGAGAACACGCCGCCGCCCGGCAGCCCCGCCGGCACGCCGGCCAGGCCGGGCGCGCAAGGCACGCCGCGCGTGGGCATCGCGACGCGGCTCAAGGTGGACGAGCTCCGCTCCTTCGTCGACTTCCCGCCGGGCTTCGGCGTCGAGGTGCCGGGCCTGGGCGCGCACACCCGCTTCGAACGCCCGCCCCTCTTGGCCACGGTGCGCATGAAGCACGGCCAGCAGGTGCATGTGCTCACGGCGCACCTGAAGTCCAAGCGGCCGAAGTTCCTGCAGGATGCGCAGGGCAACCATCTGGAGGACCGCGACGACCGCAAGGTCGGCGCGATGGCCTCCCTGCGCTCGCTGCTGATGCGCGGCGCGGAAGCCGCGGCCCTGCGCTGCATCGTCATCGACCTGCTGCAGGGCACCAACATGCCGCTGGTGGTGATGGGCGACTTCAACGACAACCCGCACAGCGTGACCACGCAACTGGTGGCCGCCACCTCCGACGTGGCCTACGACAAGGCCGCGCGCGACGTGGCGCTGTTCAACGCCTACGAGATGCAGGGCGAGTCGGCGCTCAAGAAGGACGTGGCCTACTCGCACATCCACCAGGGCTTTCCGGAAGTGCTCGACCAGATCCTGGTGAGCGAGGAGTTCGTGGCCGGCAGCCGCCACAGCCTGGGCGACGTGCGACGCGTCGACTACTTCAACGACCACCTGCACGAAGGGCGCGACCGCTCGCGCTCCGACCACGGTTTCGTGCGCGCCCTGCTGCGGCTGCGCACGAGCTGA
PROTEIN sequence
Length: 366
VPFFVAGMALPGSGHNCCAMQYIPPNYATLFVATCNLLNLANPNRAYYENQDAYTEREYERKIDWTGERFHALNADVLAVQEVWDEAALKAAIARSGLRYDFVSAPGAENTPPPGSPAGTPARPGAQGTPRVGIATRLKVDELRSFVDFPPGFGVEVPGLGAHTRFERPPLLATVRMKHGQQVHVLTAHLKSKRPKFLQDAQGNHLEDRDDRKVGAMASLRSLLMRGAEAAALRCIVIDLLQGTNMPLVVMGDFNDNPHSVTTQLVAATSDVAYDKAARDVALFNAYEMQGESALKKDVAYSHIHQGFPEVLDQILVSEEFVAGSRHSLGDVRRVDYFNDHLHEGRDRSRSDHGFVRALLRLRTS*