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SCNpilot_cont_1000_p_scaffold_634_6

Organism: SCNPILOT_EXPT_750_P_Variovorax_66_42

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(20971..21459)

Top 3 Functional Annotations

Value Algorithm Source
Putative transcriptional regulator n=1 Tax=Variovorax sp. CF313 RepID=J2T934_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 84.6
  • Coverage: 149.0
  • Bit_score: 253
  • Evalue 1.40e-64
Putative transcriptional regulator {ECO:0000313|EMBL:EJL74582.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.6
  • Coverage: 149.0
  • Bit_score: 253
  • Evalue 1.90e-64
MerR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 82.8
  • Coverage: 145.0
  • Bit_score: 248
  • Evalue 1.80e-63

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 489
ATGCCGTCTGACAGCAGGGGCGTGCCTTTCCACATCGGCGAACTGGCGGCCCGCACCGGCCGCACGGTGCATGCCATCCGCTGGTACGAGACCCAGGGGCTCGTGCCCGGCGTGGCGCGCGACGAGGGCGGTCGGCGCCTCTACGGCGAGCCGCATGTGGGCTGGCTCGACCTGATGGAGCGGCTGCGCCGCACCGGCATGTCGATCGCCGAGATGCGCGAATACACGGCGCTGGCCGTGCAGGGAAAGACCACGCTGCGCCAGCGGCGCGACATGCTCGCGGCGCACCGCGAGCGCGTGACCGAGACCATCGCCGAGTGGAAGAGGGCGCTGACCCTGGTCGAGCGCAAGATCGGCTTCTACGACGAGTGGATGGCCAGCGGCCATCGTCCGCCGCCGGTTCCCGCGGGTCCGGCAACCGCCGCTGCTGCAAAGCCTCGCGGGCGACGGCGCGGCGGCGGTGCGGGCGCCGCGGCTACTCCGCGATGA
PROTEIN sequence
Length: 163
MPSDSRGVPFHIGELAARTGRTVHAIRWYETQGLVPGVARDEGGRRLYGEPHVGWLDLMERLRRTGMSIAEMREYTALAVQGKTTLRQRRDMLAAHRERVTETIAEWKRALTLVERKIGFYDEWMASGHRPPPVPAGPATAAAAKPRGRRRGGGAGAAATPR*