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SCNpilot_cont_1000_p_scaffold_634_21

Organism: SCNPILOT_EXPT_750_P_Variovorax_66_42

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(33181..34083)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, LysR family n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V774_VARPE similarity UNIREF
DB: UNIREF100
  • Identity: 91.2
  • Coverage: 296.0
  • Bit_score: 530
  • Evalue 8.10e-148
  • rbh
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 91.2
  • Coverage: 296.0
  • Bit_score: 530
  • Evalue 2.60e-148
  • rbh
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ADU38370.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 91.2
  • Coverage: 296.0
  • Bit_score: 530
  • Evalue 1.10e-147

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 903
ATGAAACCCAATCAGTTGCACGCCTTCGTGGCGGTGGTCGAGCAGATGAGCATCCGCGCCGCGGCCCGGATGCTGGGGCTGTCGCAGCCCGCGGTGACGAAGATCGTGCGCGAGCTGGAGCGCGAGGTGGGCGCGCCGCTGGTGGAGCGCAGCGTCAAGGGCGTGCGGCTCACCGAGTTCGGCCAGGCCTTCGCGCCGCGTGCGCGGCTGCTGCTGGCCGACATGCAGCGCGCGCGGGACGAGATCGCGCAGATCCGCGACGGCGCCACCGGCACGGTGTCGATGGCGGTGAGCGCATCGTTCGCGCTCACCGTGCTGCCGACCGCTTTCAAGGACTTCCACACCCGCCTGCCCGCCGTCGACGTGCAGTTCAGCGAAGCGGTGCTGCCGTGGATGCTGGCGCGGCTGCGCGACGGCTACCTCGACTTTGCGGTGGCCCACGTGGTGCCTGGCACGCTCGATCCGCAGTTCGAGGCGCTGGAGCTGTTTCCGGTGCAACTGGTGGTGGGCATGCGCAACCGCCATCCGCTGCGCGGCGCGCGCTCGCTGCTCGACCTGTACCCGGCCGAATGGATCTTGCCGGGCGACGACGACCGCGGGCGCGAGTCGGTGGCGCCGCTGTTCACTCCGCTGGGGCTGCCGCCACCCTCGCGCATCATCCAGGGGCAGTCGGTGACGGTGGCGCTCGGGCTGGTGGGCAACATGGATTTGATCGGCCTGTTCGTCGAGCCGCTGGTCAAGCTGACTTTCAAGCGGCACGGCATCCGCCGGGTCGACGTTGACGAGGTGCTGCCGATGCTCAACGTGTGTGTGCTGCGGCGCAAGGGACAGTTGTCGACGCCGGCGGCGCAGCACTTCATCGAGTGCATCCAGCGTGCGTCGGCGGCGGAGATGCTGGCCTAG
PROTEIN sequence
Length: 301
MKPNQLHAFVAVVEQMSIRAAARMLGLSQPAVTKIVRELEREVGAPLVERSVKGVRLTEFGQAFAPRARLLLADMQRARDEIAQIRDGATGTVSMAVSASFALTVLPTAFKDFHTRLPAVDVQFSEAVLPWMLARLRDGYLDFAVAHVVPGTLDPQFEALELFPVQLVVGMRNRHPLRGARSLLDLYPAEWILPGDDDRGRESVAPLFTPLGLPPPSRIIQGQSVTVALGLVGNMDLIGLFVEPLVKLTFKRHGIRRVDVDEVLPMLNVCVLRRKGQLSTPAAQHFIECIQRASAAEMLA*