ggKbase home page

SCNpilot_cont_1000_p_scaffold_634_22

Organism: SCNPILOT_EXPT_750_P_Variovorax_66_42

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 34218..35540

Top 3 Functional Annotations

Value Algorithm Source
membrane protein n=1 Tax=Variovorax paradoxus RepID=UPI00036555E5 similarity UNIREF
DB: UNIREF100
  • Identity: 93.2
  • Coverage: 444.0
  • Bit_score: 818
  • Evalue 2.90e-234
  • rbh
major facilitator superfamily protein similarity KEGG
DB: KEGG
  • Identity: 91.1
  • Coverage: 439.0
  • Bit_score: 796
  • Evalue 4.80e-228
  • rbh
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ADU38371.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 91.1
  • Coverage: 439.0
  • Bit_score: 796
  • Evalue 2.10e-227

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1323
ATGAGCATCCCAAGCAACCCGCCGGCATCGAGCCCCGCGCGCCGGCGCCAGACCATCGTTGCCACCACCATCGGCAACGGGCTGGAGTTCTTCGACTTCACCGTCTACGGCTTCCTGGCGCTCGTGATCGGCAAGCTCTTCTTTCCGACCTTCAATTCCTACGGGCAACTGCTGCTGACGGTGGCGAGCTTCGGCGTGGGCTTCATCATGCGGCCGCTGGGCGGCATCATCATCGGCGCGTACGCCGACCGGGCGGGCCGCAAGAAGGCCATGACGCTCACCATCTTCCTGATGGCCCTGGGCTGCGCGCTGATCGCGTTCACGCCGACCTACGCGAGCATCGGCGTCGCGGCGCCGATCGTCATCGTGCTGGCGCGGCTCATCCAGGGTTTCTCGGCCGGCGGCGAGGTGGGCGCATCGACCACCCTGCTGGTCGAGCACGCCACGCCGGCCAATCGCGGCTACATGGCGAGCTGGCAGTTCGCAAGCCAGGGCCTGGGCGTGCTGATGGGCGCCGTGGTGGTGGGCGTGCTCACCACCGCGCTCTCGGCCGAAGCCATGCAGAGCTGGGGCTGGCGCGTGCCTTTCGTGATCGGCATGCTGATCGCGCCGGTGGGCATGTACATCCGCCGCCACCTCGAAGAGTCGCTGCACATCTCGCCGGCCGAAGCCGCCGCGCCGCGCGAAAGCAGCCTGAAGATCGTCTGCACGCAGCACGGCAAGACGGTGCTGGCCGCCATCCTCACGCTGGTGGGCGGCACCACGGCCGCCTACGTGGTCACGTTCTACATGCCGACCTACGCGGTGCGCGAGCTCGGGTTCACGCCGTCGGTGGCGCTGTTCGGCGCCGCGCTCACGGGCCTCATCTCCTTCGCGTTCGCGCCCTTCGTGGGCAAGCTGTCGGACGTGGTGGGCCGCAAGCCGCTCATCCTGTGGAGCCGCATCGCGCTGGCCGTGCTCATCTACCCGGGCTTCCTGTGGCTCAACGCTTCGCCCACGCCCACGGTGCTGTTCGTGGTGCTCGGCGTGTTCAGCTTCGGCCTGGTGGTGCAGACGGTGCCCGGCATCACGATGCTGCCGGAGATGTTCCCGAAGGCGGTGCGCGCGAGCGGCATGTCGCTGGTGTACAGCGTGGGCGTGGCCCTCTTCGGCGGCTTCGCGCCCTTCATCAGCACCTGGCTGCTGAACGCCACGGGCAGCAAGCTGGCACCGGCCTGGTATCTGGTGGCGATGACGGTCGTCTCGCTGATCGGCCTGCTCTGGCTGCGCGACCATACGGGCCGCGACATCGACGCCGCGGGCGCCCACGCGGCCTCGGCCTGA
PROTEIN sequence
Length: 441
MSIPSNPPASSPARRRQTIVATTIGNGLEFFDFTVYGFLALVIGKLFFPTFNSYGQLLLTVASFGVGFIMRPLGGIIIGAYADRAGRKKAMTLTIFLMALGCALIAFTPTYASIGVAAPIVIVLARLIQGFSAGGEVGASTTLLVEHATPANRGYMASWQFASQGLGVLMGAVVVGVLTTALSAEAMQSWGWRVPFVIGMLIAPVGMYIRRHLEESLHISPAEAAAPRESSLKIVCTQHGKTVLAAILTLVGGTTAAYVVTFYMPTYAVRELGFTPSVALFGAALTGLISFAFAPFVGKLSDVVGRKPLILWSRIALAVLIYPGFLWLNASPTPTVLFVVLGVFSFGLVVQTVPGITMLPEMFPKAVRASGMSLVYSVGVALFGGFAPFISTWLLNATGSKLAPAWYLVAMTVVSLIGLLWLRDHTGRDIDAAGAHAASA*