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SCNpilot_cont_1000_p_scaffold_686_13

Organism: SCNPILOT_EXPT_750_P_Variovorax_66_42

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 10555..11775

Top 3 Functional Annotations

Value Algorithm Source
Uroporphyrinogen decarboxylase {ECO:0000256|HAMAP-Rule:MF_00218, ECO:0000256|RuleBase:RU000554}; Short=UPD {ECO:0000256|HAMAP-Rule:MF_00218};; Short=URO-D {ECO:0000256|HAMAP-Rule:MF_00218};; EC=4.1.1.37 {ECO:0000256|HAMAP-Rule:MF_00218, ECO:0000256|RuleBase:RU000554};; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.3
  • Coverage: 369.0
  • Bit_score: 703
  • Evalue 1.30e-199
hemE; uroporphyrinogen decarboxylase (EC:4.1.1.37); K01599 uroporphyrinogen decarboxylase [EC:4.1.1.37] similarity KEGG
DB: KEGG
  • Identity: 92.4
  • Coverage: 368.0
  • Bit_score: 687
  • Evalue 2.20e-195
  • rbh
Uroporphyrinogen decarboxylase n=1 Tax=Variovorax sp. CF313 RepID=J2SQL5_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 94.3
  • Coverage: 369.0
  • Bit_score: 703
  • Evalue 9.50e-200
  • rbh

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1221
ATGCTCGGCGCTGCGGCGCGCCATGGATCACCGGGGCGGGTTGGTGCAACTCAAAATGCGCTGTCGGTCAATGTGCCGGTCGGTGCCGGGGTGCCCTGCGACAATGGGGGAATGCCTTTCGCCCCATTGCAAAACGACACATTCCTGCGGGCCTGCTGGCGCCAGGCCACCGATCACACGCCCGTCTGGCTGATGCGCCAGGCCGGCCGCTACCTGCCGGAATACGTGGCCACCCGCGCGAAGGCGGGCAGCTTCATGGGGCTGGCCACCAACACCGGCTACGCCACCGAGGTCACGCTGCAGCCGCTGGAGCGCTATGCGCTCGACGCGGCCATCCTGTTCTCCGACATCCTGACCGTGCCCGACGCCATGGGCCTGGGCCTGTCCTTCGAGGCCGGCGAAGGCCCGCGCTTCGCGCGCCCGGTGCGCGACGAAGCGGCGGTGGCCGCGCTCGAAGTGCCCGACATGCAGAAGCTGCGCTATGTGTTCGACGCCGTGGCCTCGATCCGCAAGGCGCTGAATGGCCGGGTGCCGCTGATCGGCTTCTCGGGCAGCCCGTGGACGCTGGCCTGCTACATGGTGGAAGGCGCGGGCTCCAGCGACTACCGCCTCGTCAAGAGCATGCTGTACAGCCGCCCCGACCTGATGCACCGCATCCTCGCGGTCAACGCCGAATCGGTGGCCGCCTACCTCAATGCCCAGATCGACGCCGGCGCGCAGGCCGTGATGGTGTTCGACAGCTGGGGCGGCGTGCTGGCCGACGGCGCGTTCCAGGAATTCAGCCTCGCCTACACGGCGCGCGTGCTGGCGGGCCTGAAGCGCACCGGCGCCGACGGACAGCCCGTGCCGCGCATCGTGTTCACCAAGGGCGGCGGCCTGTGGCTCGACGCCATGCGCGAACTCGACTGCCAGGTGCTGGGCGTGGACTGGACCGTGAACCTGGCCTCGGCGCGCAAGCAGGTCGCCGAAGGCACCGACGGCAAGGCCAAGGCGCTGCAGGGCAACATCGACCCGAACGTGCTGTTCGCGCCGCCCGACCGGATCGAGGCCGAGGTGGCGAAGGTGCTGGACGCCTTCGGCAAGCCCCACGCCGACCGCGCCACCCAGGGCCCGACGCACATCTTCAACCTGGGCCACGGCATCAGCCAGTTCACGCCGCCGGAGCACGTGGCTGCGCTGGTTCAGGCGGTGCACGCCAGGTCGCGCGCGCTGCGCGGCTGA
PROTEIN sequence
Length: 407
MLGAAARHGSPGRVGATQNALSVNVPVGAGVPCDNGGMPFAPLQNDTFLRACWRQATDHTPVWLMRQAGRYLPEYVATRAKAGSFMGLATNTGYATEVTLQPLERYALDAAILFSDILTVPDAMGLGLSFEAGEGPRFARPVRDEAAVAALEVPDMQKLRYVFDAVASIRKALNGRVPLIGFSGSPWTLACYMVEGAGSSDYRLVKSMLYSRPDLMHRILAVNAESVAAYLNAQIDAGAQAVMVFDSWGGVLADGAFQEFSLAYTARVLAGLKRTGADGQPVPRIVFTKGGGLWLDAMRELDCQVLGVDWTVNLASARKQVAEGTDGKAKALQGNIDPNVLFAPPDRIEAEVAKVLDAFGKPHADRATQGPTHIFNLGHGISQFTPPEHVAALVQAVHARSRALRG*