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SCNpilot_cont_1000_p_scaffold_975_3

Organism: SCNPILOT_EXPT_750_P_Variovorax_66_42

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(1645..2523)

Top 3 Functional Annotations

Value Algorithm Source
endonuclease n=1 Tax=Variovorax paradoxus RepID=UPI000370798A similarity UNIREF
DB: UNIREF100
  • Identity: 97.6
  • Coverage: 255.0
  • Bit_score: 511
  • Evalue 6.50e-142
  • rbh
putative xylose isomerase similarity KEGG
DB: KEGG
  • Identity: 96.5
  • Coverage: 255.0
  • Bit_score: 505
  • Evalue 1.10e-140
  • rbh
Putative xylose isomerase {ECO:0000313|EMBL:AGU49055.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.5
  • Coverage: 255.0
  • Bit_score: 505
  • Evalue 5.00e-140

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 879
ATGCGCGATTTCTCGCAAGATCACGACTGGCTGTCGATCAACACCGCCACGGTGCGCAAGCAGTCGGGCGCCGAGGTGCCGCTGGACCGCATCATCGACCAGTGCGCCGAACGCGGCATCCGTGCGATCAGCCCATGGCGCGACCAGGTGGCGGCTGTCGGCCTCGACAAGGTGGCGAAGCAATTGAAGGCGCACGGCATCGGCCTCTCGGGCTACTGCCGCGGCGGATTCTTCCCCGCGCCCGATGCAGCCTGCCTGAAGGCGGCGCTCGACGACAACCGCCGTGCCATCGACGAAGCGAAGACGCTCGATGCGCCCTGCCTCGTGCTGGTGGTCGGCGCCCTGCCCGGCGCGCTCGACGGCAAAGCGGCCTACAAGGACATCGGCCGCGCGCGCGGCGAAGTACGCGACGGCATCGCCGCATCGCTCGAGTACGCCCGCGAGGTCGGCATGCCGCTGGCCATCGAGCCCCTGCACCCGATGCAGGCGGCCGACCGCGCATGCATCAACACGCTGGAGCATGCGCTCGACCTGTGCGACGAACTCGACGCGGGCAAGAGCGGCATGCTGGGCGTGGCGCTCGACATCTATCACGTGTGGTGGGACCCGAAGCTGCAGCAGCAGATCGCCCGCGCGGGCCGGGAGCGGTTGCTGGCGTATCACGTCTGCGACTGGCTTACGCCTACGCGCGACCTGCTGAGTGATCGCGGGATGATGGGTGATGGCGTGGTCGAGTTGAAGAAGATTCGCGGGTGGGTCGAGGACCGGGTACTCCCCTCCGCGAATGTCCCCCGGCCTGCGGCCTCCTCCTTTATTTCGCTGCGGGGAGCACCCGGCGCCCTGTGCACGATGGGCGCGGCTGTTGCGCTTGCGGTTTGA
PROTEIN sequence
Length: 293
MRDFSQDHDWLSINTATVRKQSGAEVPLDRIIDQCAERGIRAISPWRDQVAAVGLDKVAKQLKAHGIGLSGYCRGGFFPAPDAACLKAALDDNRRAIDEAKTLDAPCLVLVVGALPGALDGKAAYKDIGRARGEVRDGIAASLEYAREVGMPLAIEPLHPMQAADRACINTLEHALDLCDELDAGKSGMLGVALDIYHVWWDPKLQQQIARAGRERLLAYHVCDWLTPTRDLLSDRGMMGDGVVELKKIRGWVEDRVLPSANVPRPAASSFISLRGAPGALCTMGAAVALAV*