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SCNpilot_cont_1000_p_scaffold_975_11

Organism: SCNPILOT_EXPT_750_P_Variovorax_66_42

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(10247..10921)

Top 3 Functional Annotations

Value Algorithm Source
TetR family transcriptional regulator n=1 Tax=Variovorax paradoxus RepID=UPI0003809A2C similarity UNIREF
DB: UNIREF100
  • Identity: 94.6
  • Coverage: 223.0
  • Bit_score: 415
  • Evalue 2.80e-113
  • rbh
Transcriptional regulator {ECO:0000313|EMBL:EJL76232.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.2
  • Coverage: 224.0
  • Bit_score: 415
  • Evalue 5.20e-113
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 93.8
  • Coverage: 224.0
  • Bit_score: 413
  • Evalue 4.40e-113
  • rbh

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 675
ATGAAGGCCCCCAAGGACTCCACGCCCGACATGCTCGATCCGGCCGAAGCGCTGGAGCCTCGCTCGCGCGACGCCGACCGCTCGCAGCTCGCCATCCTCGCATCGGCGCGCGACGAGTTCTCCGCGCGCGGCCTCGCCGGCGCGCGCATGGACAGCATCGCCGAGCGCGCCGGGCTCAACAAGCGCCTCATCTACTACTACTTCGGCAGCAAGGACGACCTGTTCCTGGCCGTGCTGGAGCGCGTGTACGCCGACATCCGCTCGGCCGAGCAGCGCCTGCACCTCGACGAGATCGACCCCGTGGAGGCCATCCGCCAGCTGGTGTCCTTCACCTGGCACTACTACCTGGAGCACCCGGAGTTCATCACGCTGCTCAACAGCGAGAACCTGCACTGCGCGGCGCACCTGAAGCGCTCCGAGCGCATCCAGGAAATGAACTCGCCGCTGGTGCAACTGCTAGACACCGTGCTCGAGCGCGGCCGCCGCGACAACCTTTTCCGCGCAGGCGTGGACCCGGTGCAGCTCTACATCTCGATCGCGTCGCTGTGCTACTTCTACCTGTCGAACAACCACACGCTCTCGGCCATCTTCGGCCGTGACCTGCGCGCACCCAAAGCGATGGCGCAACGCCTCTCGCACATGACCGACCTGGTCCTGGGCTACGTCCTGCACTGA
PROTEIN sequence
Length: 225
MKAPKDSTPDMLDPAEALEPRSRDADRSQLAILASARDEFSARGLAGARMDSIAERAGLNKRLIYYYFGSKDDLFLAVLERVYADIRSAEQRLHLDEIDPVEAIRQLVSFTWHYYLEHPEFITLLNSENLHCAAHLKRSERIQEMNSPLVQLLDTVLERGRRDNLFRAGVDPVQLYISIASLCYFYLSNNHTLSAIFGRDLRAPKAMAQRLSHMTDLVLGYVLH*