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SCNpilot_cont_1000_p_scaffold_984_1

Organism: SCNPILOT_EXPT_750_P_Variovorax_66_42

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(2..529)

Top 3 Functional Annotations

Value Algorithm Source
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V324_VARPE similarity UNIREF
DB: UNIREF100
  • Identity: 90.9
  • Coverage: 176.0
  • Bit_score: 324
  • Evalue 5.20e-86
binding-protein-dependent transport systems inner membrane component; K02033 peptide/nickel transport system permease protein similarity KEGG
DB: KEGG
  • Identity: 90.9
  • Coverage: 176.0
  • Bit_score: 324
  • Evalue 1.60e-86
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ADU39163.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.9
  • Coverage: 176.0
  • Bit_score: 324
  • Evalue 7.30e-86

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 528
ATGGGCCTGTTCCTGCTGAAGCGCACGCTGACGCTGATCGGCACGCTGGTCGGCGCGTCGATCATCGTGTTTCTGGTGCTGGAGATTCTTCCGGGCAACGCGGCACAGATGCTGATGGGGCCGGATGCGTCGCCTGAAGCAGTCGCGGCGCTGGCGACCAAGCTCGGCCTCGACCTGCCGGCATGGACGCGCTACTGGCACTGGATCGGCGGCCTGCTGACCGGCAACCTGGGCGACAGCTACGCCTACAGCTCGCCGGTGCTCGACCTGATCCTGGAGCGCCTGGCACTCACCATGCCGCTCGCACTGCTGGCGATGTTCTTCACCACGGTGATCGCGCTGCTGGTGGGCGTGACCGCCGCCGCGCGCCACAACAAGCTGGGCGACGTCGGCCTGATGGGCATGGCCCAGGTCGGCATCGCCATTCCCAATTTCTGGTTCGCGATTCTTCTGATCCTCGTGTTCTCGGTGAAGCTGCAGTGGTTCTCCGCCGGCGGCTTCGAGGGCTGGGGCGACGGCTTCTTCTCG
PROTEIN sequence
Length: 176
MGLFLLKRTLTLIGTLVGASIIVFLVLEILPGNAAQMLMGPDASPEAVAALATKLGLDLPAWTRYWHWIGGLLTGNLGDSYAYSSPVLDLILERLALTMPLALLAMFFTTVIALLVGVTAAARHNKLGDVGLMGMAQVGIAIPNFWFAILLILVFSVKLQWFSAGGFEGWGDGFFS