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SCNpilot_cont_1000_p_scaffold_984_22

Organism: SCNPILOT_EXPT_750_P_Variovorax_66_42

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 32325..32564

Top 3 Functional Annotations

Value Algorithm Source
Putative hemagglutinin/hemolysin-related protein n=1 Tax=Ralstonia solanacearum SD54 RepID=V5ANV4_RALSL similarity UNIREF
DB: UNIREF100
  • Identity: 64.6
  • Coverage: 79.0
  • Bit_score: 108
  • Evalue 2.60e-21
RTX family T1SS secreted agglutinin {ECO:0000313|EMBL:KFB97717.1}; Flags: Fragment;; TaxID=1005994 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Trabulsiella.;" source="Trabulsiella guamensis ATCC 49490.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.8
  • Coverage: 78.0
  • Bit_score: 117
  • Evalue 1.00e-23
hemagglutinin/hemolysin-related protein (fragment) similarity KEGG
DB: KEGG
  • Identity: 64.6
  • Coverage: 79.0
  • Bit_score: 108
  • Evalue 8.30e-22

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Taxonomy

Trabulsiella guamensis → Trabulsiella → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 240
GTGGGCTACACCGCCGACGCCGACGGGGCCGCGCGCTACATCAACGGCGTTGCCGTCATCGATTCGGGGGATGCCATCGGCAACTACCTGAGCGTGACGGTCAGCGGCGGCAACACGACTTTGAGCATCGACCGTGACGGGTCGGGCGGTGCGTATTCGTCAACGACGCTTATCACCCTCAATGGCGTGACCACCGACCTCGCCACGCTGCTGGCCAACCACCAGCTCGTGCTGGTCTGA
PROTEIN sequence
Length: 80
VGYTADADGAARYINGVAVIDSGDAIGNYLSVTVSGGNTTLSIDRDGSGGAYSSTTLITLNGVTTDLATLLANHQLVLV*