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SCNpilot_cont_1000_p_scaffold_754_1

Organism: SCNPILOT_EXPT_750_P_Variovorax_66_42

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 3..470

Top 3 Functional Annotations

Value Algorithm Source
transporter n=1 Tax=Variovorax paradoxus RepID=UPI0003818C65 similarity UNIREF
DB: UNIREF100
  • Identity: 83.9
  • Coverage: 155.0
  • Bit_score: 273
  • Evalue 1.60e-70
outer membrane autotransporter barrel domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 81.9
  • Coverage: 155.0
  • Bit_score: 265
  • Evalue 7.90e-69
Outer membrane autotransporter barrel domain-containing protein {ECO:0000313|EMBL:AGU49808.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.9
  • Coverage: 155.0
  • Bit_score: 265
  • Evalue 3.50e-68

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 468
AGCCTGCTGGGCTCGATCGAGGTGGGCCAGGCCTTCCCGATCGGCAGCAGCGGCTGGACCGTCGAGCCGCAACTGCAGCTGATCCACCAGCACATGGACCTGAGCAACTCGGCCATCCTGGGCGCGGTGGTCCAGCCCCAGGTCGACAGCGGCTGGCTCGCCCGTGCGGGCGTGCGGGTCAAGGGCGAGATCGACACCGGCATGGGCATGCTGCAGCCGTACGGTCGCGTGAACGTGTACAAGACCTCGCGCGGCACGGACGTGGCGCGCTTCGTCAACGGCGCGACCACCACCAACATCGCGGCGCCCATCGGCGGCACCAGCACCGAACTGGCGGGCGGCTTCACGCTGGCCCTGAACCCGTCGACCAGCCTTTATGGCGAAGTGGGCAAGCTGTGGTCTTCGGGTGGCGACGCCAAGGTGAAGAGCGGCATCAACGGCTCGCTGGGCGTGCGGGTGAAGTGGTAA
PROTEIN sequence
Length: 156
SLLGSIEVGQAFPIGSSGWTVEPQLQLIHQHMDLSNSAILGAVVQPQVDSGWLARAGVRVKGEIDTGMGMLQPYGRVNVYKTSRGTDVARFVNGATTTNIAAPIGGTSTELAGGFTLALNPSTSLYGEVGKLWSSGGDAKVKSGINGSLGVRVKW*