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SCNpilot_cont_1000_p_scaffold_754_4

Organism: SCNPILOT_EXPT_750_P_Variovorax_66_42

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 3280..4464

Top 3 Functional Annotations

Value Algorithm Source
lipid-transfer protein n=1 Tax=Variovorax paradoxus RepID=UPI00036C88A3 similarity UNIREF
DB: UNIREF100
  • Identity: 97.7
  • Coverage: 394.0
  • Bit_score: 780
  • Evalue 1.00e-222
  • rbh
Variovorax paradoxus strain MEDvA23 contig_132, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ16736.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.2
  • Coverage: 394.0
  • Bit_score: 776
  • Evalue 2.00e-221
thiolase similarity KEGG
DB: KEGG
  • Identity: 97.2
  • Coverage: 394.0
  • Bit_score: 775
  • Evalue 1.00e-221
  • rbh

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1185
ATGAGTCAAGACGTCCATGTGGTCGGGGTCGGCATGATCCCCTTCACCAAGCCCGGCGCCAACCTGCCGTATCCGCAGATGGCCGCCCAGGCCGCCAATGCCGCGCTGAAGGACGCCGGCATCGGCTACGAACTGGTGCAGCAGGCCTACGTCGGCTACGTTTATGGCGATTCCACCGCCGGCCAGCGCGCGCTGTACGAGGTGGGCATGACCGGCATTCCGGTCGTCAACGTCAACAACAACTGCTCCACCGGCTCCACCGCGCTGTTCCTCGCGCGCCAGGCCGTGGCCAGCGGCGCCGCCGACTGCGTGCTGGCGCTGGGCTTCGAGCACATGAGCCCCGGCGCGCTCGGCGCGGTGTTCAACGACCGGCCCAGCCCCTTCGACCATTTCGAGCACATCACCGACGAACTGGTCGGCAACGAGCAGGTGCCGCTGGCGCTGCGCTACTTCGGCGGCGCGGGGCTGGCGCACATGCAGCAGTACGGCACGCAGATGTCGACCTTCGCGAAGATCCGCGCCAAGGCCAGCCGCCATGCGTCGAACAACCCGGTGGCGCTGTTCCGCACTGTGGTCACCGAAGACGAGGTCATGGCCGCGCCCGTCATGTGGCCCGGCGTGATGACGCGGCTCATGGCCTGCCCGCCCACCTGCGGCGCCGCGGCGGCCATCGTGTGTTCGCCGCGCTTCGCCGAGCGCCACGGGCTGGACCGCAGCGTGCGCATCAAGGCGCAGGCCATGACCACCGATCGGCCCATCACCTTCGAGAGCCGCGACATGCGCGAGGTGGTCGGCTTCAGCATGGCGCAGGAGGCCGCGCAGAAGGTGTACGACGCGGCCGGTGTCGGCCCGCAGGACGTGGACGTGGTCGAGCTGCACGACTGCTTCGCGCACAACGAGCTCATCAGCTACGAGGCGCTGGGCCTTTGCCCCGTGGGCGGCGCCGAGAAGTTCGTGGTCGACGGCGACAACACCTACGGCGGCAAGGTCGTGACCAATCCGTCGGGCGGCCTGCTGTCGAAGGGGCACCCGCTGGGCGCCACGGGGCTGGCGCAATGCACCGAGCTGGTCCAGCAGTTGCGCGGCACGGCCGACAAGCGGCAGGTGGAGGGCGCGCGGCTGGCGCTGCAGCACAACCTCGGCCTGGGCGGCGCCTGCGTGGTGACGCTCTACGAACGCGTCTGA
PROTEIN sequence
Length: 395
MSQDVHVVGVGMIPFTKPGANLPYPQMAAQAANAALKDAGIGYELVQQAYVGYVYGDSTAGQRALYEVGMTGIPVVNVNNNCSTGSTALFLARQAVASGAADCVLALGFEHMSPGALGAVFNDRPSPFDHFEHITDELVGNEQVPLALRYFGGAGLAHMQQYGTQMSTFAKIRAKASRHASNNPVALFRTVVTEDEVMAAPVMWPGVMTRLMACPPTCGAAAAIVCSPRFAERHGLDRSVRIKAQAMTTDRPITFESRDMREVVGFSMAQEAAQKVYDAAGVGPQDVDVVELHDCFAHNELISYEALGLCPVGGAEKFVVDGDNTYGGKVVTNPSGGLLSKGHPLGATGLAQCTELVQQLRGTADKRQVEGARLALQHNLGLGGACVVTLYERV*