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SCNpilot_cont_1000_p_scaffold_754_11

Organism: SCNPILOT_EXPT_750_P_Variovorax_66_42

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(8653..10947)

Top 3 Functional Annotations

Value Algorithm Source
TonB-dependent siderophore receptor n=1 Tax=Variovorax sp. CF313 RepID=J2TLY7_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 90.7
  • Coverage: 766.0
  • Bit_score: 1393
  • Evalue 0.0
  • rbh
TonB-dependent siderophore receptor {ECO:0000313|EMBL:EJL79577.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.7
  • Coverage: 766.0
  • Bit_score: 1393
  • Evalue 0.0
rubA; rubredoxin RubA; K02014 iron complex outermembrane recepter protein similarity KEGG
DB: KEGG
  • Identity: 59.8
  • Coverage: 767.0
  • Bit_score: 909
  • Evalue 6.70e-262
  • rbh

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2295
ATGACCCGTTTCTCGTCCTCCACGCGCCGCCGCACGCCGGTTGCGCTCGCACTCATCGGCCTCGTCTCCTCGCTGCCCGCCGCGTTCGCGCAGCAGGCCGTGCAACCGGCTGCGCCAAGCAGCACCGCAAGCTCGCCCGCCCCCGGCACTTCCGTGCCGACCACGCTGCGCGAAGTCCAGGTGCAAGGCGCGCAGGACAAGACCGGCTTCGGCGCCAACCCCTCGACGATCAGCCGCCTGCCGGCCGACCTGCGCGACGCGCCGCAGTCCATCACCGTGATCAACCAGGCCGTGATGCAGTCGCAGGCCGCGACCTCGCTGGCCAGCGCGCTGCGCAACGTGCCGGGCCTGACCATCGGCGGCGCCGAAGGCGGGCAGATCGGCACCAACATCAACCTGAACGGTTTCTCGGCCCGCACCGACCTGTACCTGGACGGCGCGCGCGACCGCGCCCAGTACTACCGCGACACCTTCGCCCTCGAGTCGGTCGAGGTGCTCATGGGCCCCTCGTCGATGCTGTTCGGCCGCGGCTCCACCGGCGGCATCATCAACCAGGTGACCAAGAAGCCGTCGCTCACGCCCGCGGGCGAAGTGTCGGTGTCGGCCAGCACCACGGGCCTGGTGCGCTCGACCGTCGACATCAACAAGCCGCTGTCCGACACCTCGGCCTTTCGCATCGCGGCCATGGGCCAGCAAGGCGACGCCAGCACGCGCGAGCAGACCAAGCTGAAGGACTTCGGCCTGGATGCCTCGCTCAAGTTCGGCATCAACACGCCGACGCAGGTCACGCTGTCGGCGCTGGTGCAGCACAACCGCGACCAGCCCGACTACGGCGTGCCGCCGCTGAACGGCCACCCGGCGAAGGTCGATCGCGACCAGGCCTACGGCTTCAGCGACGACCGCACCATCTCCGATATCCAGGCCTTCAGCGCCCTGGTGCAGCACAAGATCACGGCCGACACCTCGATCCGCAACCAGACCCAGTACAACGACGTGACCACCGACGCGCGCGAGACCGCGCCGCAGTCCATCGGCACGCTGTCGTCGAAGAACGTGTTCACGCCCTTCTCGACCGGCACCACGGCCGTGCCGGCAGCTGCGTTCTCGTCGCTGCCGCTGGACACGCTGTGGGTGCGCCAGCAGAGCCATGACCGCACGATCCACGACAAGTCGCTGTTCAACCTGACCGAGCTCAGCACCAAGTTCAACACCGGCTCGGTCAAGCACTCGCTGCTCGTGGGCCTCGAGCTGGGCCACGACACCTACGAGAACCAGGCCTACTACCGCAACGGCACCTGCAACGGCGTGGCGCTGAACCCGGCGGGCGGCACCAGCGGCTATGCCGCCTGCTCGCCGCTGCTTGCGCCCTACCAGGGCAACACGCCGAGCACCGCGCCCAGCCTGCCCGGCAACCTCGCCACCGCCAGCGCCACCACGGTGGCCGGCTACGTGAACGACACGATCGAACTCAGCCCGCAGTGGAAGCTGGTGGCCGGCGTGCGCCAGGACCACTACCGCGCCAGCATCTTCAACAGCATTCCCTCCGCCACCACGCTGGCCTCCGAAAGCCAGACCGTCGACTTCACCAGCGTGCGCGCCGGCGCCATCTGGCAGCCCACGCCAGAGCAGTCGTACTACGTGTCGTACAGCACCTCGTTCAATCCCTCGCTCGAGCAGCTGGTAGCCACCACCGGCGGCACGCAGCCGCTGCCGCCCGAGAAGAACAAGGCCTACGAACTCGGCGGCAAGTGGGACCTGAACGACGGCAATCTCTCACTGACGGCCGCCGCGTTCCAGATCACGCAGACCAACGCCCGCGCGCAGAACAACGACGGCACCTACAGCGCGACCGGCACCATCCGCGTGAACGGCGCACGCGCAGGCATTGCGGGCCGCGTGACCGACAAGCTGCAGCTCTTCGGCGCCTATACGCACCTGGACGCGACCATCGTCGACGGCATCGCCCCCGGCACGCTCGGCAAGATACCCGCCAACACGCCGAAGGACGCGGCCAGCCTGTGGGCCACCTACGCCATCACGCCCGAATGGGAAGTCGGCGGCGGCACCACCTACAGCGCGAAGCGCTACGCCAACAACACCGACCTGGTGGAGGTCGGCGGCTACGTGCGGCTCGATGCGATGGTGGCTTACCATCAGCCCAAGTACGACATCCGGCTGAACCTGTTCAACCTGGCCAACCGCCACTACTACGACGCGCTGATCCCCTCGGACGGCGGCCGCGCGGTGCCGGGCTCGGGCCGGGCCGCCACGCTGACCTTCACCTACCGCCTCTGA
PROTEIN sequence
Length: 765
MTRFSSSTRRRTPVALALIGLVSSLPAAFAQQAVQPAAPSSTASSPAPGTSVPTTLREVQVQGAQDKTGFGANPSTISRLPADLRDAPQSITVINQAVMQSQAATSLASALRNVPGLTIGGAEGGQIGTNINLNGFSARTDLYLDGARDRAQYYRDTFALESVEVLMGPSSMLFGRGSTGGIINQVTKKPSLTPAGEVSVSASTTGLVRSTVDINKPLSDTSAFRIAAMGQQGDASTREQTKLKDFGLDASLKFGINTPTQVTLSALVQHNRDQPDYGVPPLNGHPAKVDRDQAYGFSDDRTISDIQAFSALVQHKITADTSIRNQTQYNDVTTDARETAPQSIGTLSSKNVFTPFSTGTTAVPAAAFSSLPLDTLWVRQQSHDRTIHDKSLFNLTELSTKFNTGSVKHSLLVGLELGHDTYENQAYYRNGTCNGVALNPAGGTSGYAACSPLLAPYQGNTPSTAPSLPGNLATASATTVAGYVNDTIELSPQWKLVAGVRQDHYRASIFNSIPSATTLASESQTVDFTSVRAGAIWQPTPEQSYYVSYSTSFNPSLEQLVATTGGTQPLPPEKNKAYELGGKWDLNDGNLSLTAAAFQITQTNARAQNNDGTYSATGTIRVNGARAGIAGRVTDKLQLFGAYTHLDATIVDGIAPGTLGKIPANTPKDAASLWATYAITPEWEVGGGTTYSAKRYANNTDLVEVGGYVRLDAMVAYHQPKYDIRLNLFNLANRHYYDALIPSDGGRAVPGSGRAATLTFTYRL*