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SCNpilot_cont_1000_p_scaffold_754_18

Organism: SCNPILOT_EXPT_750_P_Variovorax_66_42

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 19206..19751

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI000364C02D similarity UNIREF
DB: UNIREF100
  • Identity: 73.4
  • Coverage: 177.0
  • Bit_score: 279
  • Evalue 2.60e-72
Variovorax paradoxus strain MEDvA23 contig_49, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ28243.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 79.6
  • Coverage: 181.0
  • Bit_score: 296
  • Evalue 2.90e-77
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 69.2
  • Coverage: 39.0
  • Bit_score: 60
  • Evalue 5.90e-07

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 546
ATGAACGTCAGCCGATTCGACGAGGGCCTGGAGCACCGCAATATCCTGCCCTACGACCCCGTGTACGCCGAGGTGTTCGCGCAAGTGCAGCGGCATGTTGAGCAACGCCACAGCGGCGTGGAACTCGTCCACATCGGAAGCACCGCGATCATCGGCTTGCGGGGCAAACCGATGGTGGACATCGCGGCCATCACGAGCAGGGAAGACCTGCGCGCAGAGCAGCAGTCGTTCGAAGCACTCGGGTTTCATCGGCGCGCGGTGTGGGTCGACAGGGACGAGAAACCTTATGTCTGCGCCAGCGTCCGGCACGACGGGCGCGTGTTCAACGTCAACATCCACATCTGCCATCGCGGCGATCCGGTCCACAAGGACTCGCTGGCGTTCATGGAGATCCTCGCGCGTCGTCCGGACCTGCGAAAAAGCTACGAGCAAGCCAAGGACCGCGCGCATGCGATCGATGCGGTCAACCCCGAGATCTACAACCGCGAAAAGGAAGCCGTGATCCGCGAGATTCATGCGCAGATCGAGCGGGCGTCGCGGGGTTGA
PROTEIN sequence
Length: 182
MNVSRFDEGLEHRNILPYDPVYAEVFAQVQRHVEQRHSGVELVHIGSTAIIGLRGKPMVDIAAITSREDLRAEQQSFEALGFHRRAVWVDRDEKPYVCASVRHDGRVFNVNIHICHRGDPVHKDSLAFMEILARRPDLRKSYEQAKDRAHAIDAVNPEIYNREKEAVIREIHAQIERASRG*