ggKbase home page

SCNpilot_cont_1000_p_scaffold_180_4

Organism: SCNPILOT_CONT_1000_P_Alphaproteobacteria_novel_41_6_7

near complete RP 52 / 55 BSCG 51 / 51 MC: 1 ASCG 10 / 38
Location: 1324..1944

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L4 id=3298607 bin=GWC2_Alphaproteobacteria_42_16 species=Rhodospirillum centenum genus=Rhodospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good + similarity UNIREF
DB: UNIREF100
  • Identity: 86.0
  • Coverage: 207.0
  • Bit_score: 354
  • Evalue 5.50e-95
  • rbh
50S ribosomal protein L4 {ECO:0000256|HAMAP-Rule:MF_01328}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.9
  • Coverage: 206.0
  • Bit_score: 354
  • Evalue 7.70e-95
rplD; 50S ribosomal protein L4; K02926 large subunit ribosomal protein L4 similarity KEGG
DB: KEGG
  • Identity: 65.5
  • Coverage: 206.0
  • Bit_score: 266
  • Evalue 6.20e-69

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

uncultured bacterium → Bacteria

Sequences

DNA sequence
Length: 621
ATGAAGTACGAAGTTCGTAATTTTGATAATAAAAAGGTGGGGGAAATCCAGTTAAGCTCTGAGGTTTTCTCTACGCCGCTCCGCCAAGATATTTTGGCTCGCATGGTACATTGGCAACTTGCCAAGCGTCGTGCTGGAACTCATTCTACGAAGGGCATTAGCCAGATCAGTGGAACGACAAAAAAACCATGGAAACAGAAGGGTACGGGACGTGCGCGTCAGGGAAGCCTACGCTCTCCTCAATTTCGAGGAGGTGCTGTGATTTTTGGTCCACTCCCTCGAGACCATGGATATAAATTGCCTAAAAAGGTCAGGCAACTAGCATTAAAGACAGCTCTTTCATCGAAAGTTGCAAGTGGGGAACTGCTTATTGTCGAAGACTTGAATGCAGGAACCACAAAGACAAAGGATCTTGTAAAAAAATTTCAGGGGTTGGGTTTACGTTCGGCCTTGATTATTGATGGTGCAGAGGTTAATAAAGACTTTGCACGTACGGCGGCCAATCTTCCTGGAGTGGATGTTCTCCCCCAACAAGGCATTAATGTTTATGATATTCTCAGACATGAGCACTTGGTCTTGACGAAAGCGGCCCTTGAAAATCTAGAAAGCAGATTAAAATGA
PROTEIN sequence
Length: 207
MKYEVRNFDNKKVGEIQLSSEVFSTPLRQDILARMVHWQLAKRRAGTHSTKGISQISGTTKKPWKQKGTGRARQGSLRSPQFRGGAVIFGPLPRDHGYKLPKKVRQLALKTALSSKVASGELLIVEDLNAGTTKTKDLVKKFQGLGLRSALIIDGAEVNKDFARTAANLPGVDVLPQQGINVYDILRHEHLVLTKAALENLESRLK*