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SCNpilot_cont_1000_p_scaffold_507_8

Organism: SCNPILOT_CONT_1000_P_Alphaproteobacteria_novel_41_6_7

near complete RP 52 / 55 BSCG 51 / 51 MC: 1 ASCG 10 / 38
Location: 10065..11204

Top 3 Functional Annotations

Value Algorithm Source
ABC-type uncharacterized transport system id=4896252 bin=GWC2_Alphaproteobacteria_42_16 species=Brassica rapa genus=Brassica taxon_order=Brassicales taxon_class=unknown phylum=Streptophyta tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good + similarity UNIREF
DB: UNIREF100
  • Identity: 40.2
  • Coverage: 336.0
  • Bit_score: 201
  • Evalue 1.90e-48
Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 40.2
  • Coverage: 336.0
  • Bit_score: 201
  • Evalue 2.60e-48

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Taxonomy

R_Alphaproteobacteria_42_30 → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1140
ATGGGAAGAGGAGTGAATCGTCGCGTCGAAAGCTTCACAAAAATCCTACCCTTTCCTCAGGTTCTCCTATACAATGACTTAAAATTAAAAGGGTCAAGATTGATGGCAGAGCCCTCAGTAAACGACATGAATGGACAAATTCAGCAGAATGCTTGGACTCCAAAAGCTTCCCAACAACAACCCCTTCACCCAATGGTCTCAGGCGGAGGTTATATGCCACCCCCGCCGTCACTGCCCACTCTTCCTATTCAAGGGATTAGTGCTCAAGGCCTCAGCAAAACCAAAGAAATGACGGTGAATATGAGCAATTTTTCTCTCCTTGGCATTGCTTCCTGTTTAATGCTCCTCGGAGCTCTTACATTTTTAGGAGGGTTTTTGGTCGGAATGTGGTTTGCAGGACCTTCGATACCTTCTCTCGCAACTACATTGAATCAAGTCTCCGCACTAGGCCTTTTACCCCACCAACAGCAGCAACCTATCCCGCAGAATACTGCTATTCCTACTCAAGGGAGCCAAGCTCCAAGTTTAACCAGTCAAGCGGGAACACTCACACAAACCGCTGTTACACGTGCCACGATACCAAACGTACCTTCGTTTTTAGCTCCTCTTGTTACGGCTACGCAAACTGCTGCTGGACAACAATTGGGACACAAAGTCCAACAGCAAGTTAACCGTCGAACAGGCCAAGTTGAGCCACCTGCTCCACGGCCTCAACCTTCTTCTCCTCCCGAATTTCAGAGTACAACGTCCTATACTCAGCCTGGTGCTCCTTCCCCCAATCACCCATTTGAGGAAACTCTCGCTACAGGGATGAGCGAACAAAAAGGAACCCCTTCCAAGTCACGCACTTCAGAAGGGTCTACTCCACTCTCTCACGGAAATGAAGGTTATACAATTCAGCTCGGGGTCTATGCTTCAAAAGATAACGCAAATGCCCTTGTGAATGACTTGCAGGCTTTGAACTTTATCGCGCACGTATCTGAAAGTAAGGGCTCTGATGGGACTCCTTTATATTATGTTCACAGTGGACATTATAAAGATTATACTACAGCCTTAGAGGCAGCTTCCCAATTTGCGACACAGAATATTCCTGGAGCAGTCATTGTGAAAGTTTCTCAAAAAAATGTAAGCGCTTCATGA
PROTEIN sequence
Length: 380
MGRGVNRRVESFTKILPFPQVLLYNDLKLKGSRLMAEPSVNDMNGQIQQNAWTPKASQQQPLHPMVSGGGYMPPPPSLPTLPIQGISAQGLSKTKEMTVNMSNFSLLGIASCLMLLGALTFLGGFLVGMWFAGPSIPSLATTLNQVSALGLLPHQQQQPIPQNTAIPTQGSQAPSLTSQAGTLTQTAVTRATIPNVPSFLAPLVTATQTAAGQQLGHKVQQQVNRRTGQVEPPAPRPQPSSPPEFQSTTSYTQPGAPSPNHPFEETLATGMSEQKGTPSKSRTSEGSTPLSHGNEGYTIQLGVYASKDNANALVNDLQALNFIAHVSESKGSDGTPLYYVHSGHYKDYTTALEAASQFATQNIPGAVIVKVSQKNVSAS*